PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG049970.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 514aa MW: 57184.9 Da PI: 8.6115

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG049970.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	41.5	2.6e-13	58	97	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 +kk CnC++skClk+YCeCfa+g +C+ C+C++C+N+ e+ TRIDC3BG049970.6 58 KKKCCNCRHSKCLKLYCECFASGIYCDG-CNCTNCFNNVEN 97 799***********************.******9875 PP
2	TCR	51.2	2.5e-16	142	180	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC dCkN TRIDC3BG049970.6 142 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNF 180 589***********************************5 PP

Sequence ? help Back to Top
Protein Sequence Length: 514 aa Download sequence
MRRCRGRHYR WRCPCPCRRL GRPYRSRYSA RRSPFPCEPE SPKPRGRLYD GKDGTPTKKK 60 CCNCRHSKCL KLYCECFASG IYCDGCNCTN CFNNVENEVA RREAIEATLE RNPDAFRPAS 120 RSCFTTEMEL PEVAGDLPLI GKHNKGCHCK KSGCLKKYCE CFQANILCSE NCKCMDCKNF 180 DGSEDRKHLN FDHKNVIHMQ QAANAAVNGA IGATALSSPS TSRKRKHIDS SLDLSTKEHL 240 AIRNGQLSQV IYQKNAMASD GSFPIGQSAH PHMMGPFKVT YRPLLADIIQ PGDVKELCKL 300 LVTVSGQAAK AYTGRKIQEE KVAEKEDGVG GSLALTNHDR EGKSKDQNHR KISIDDHSSG 360 GTDMGKASLD DSRPDCTDDQ KSSRPMSPGT LALMCDEQDA MFATSQNAVA PSAIDVDQNR 420 SELYAEQERC VLTEFRDCLR KLVQYGRMKE EKYSMAIRSE VTGHPGQVNG ALRIPYPKVD 480 VPVVKTFPQS SSKHLVAGNT SSGHLDKRLK PENT

Sequence ? help Back to Top

Protein Sequence Length: 514 aa Download sequence

MRRCRGRHYR WRCPCPCRRL GRPYRSRYSA RRSPFPCEPE SPKPRGRLYD GKDGTPTKKK  60
CCNCRHSKCL KLYCECFASG IYCDGCNCTN CFNNVENEVA RREAIEATLE RNPDAFRPAS  120
RSCFTTEMEL PEVAGDLPLI GKHNKGCHCK KSGCLKKYCE CFQANILCSE NCKCMDCKNF  180
DGSEDRKHLN FDHKNVIHMQ QAANAAVNGA IGATALSSPS TSRKRKHIDS SLDLSTKEHL  240
AIRNGQLSQV IYQKNAMASD GSFPIGQSAH PHMMGPFKVT YRPLLADIIQ PGDVKELCKL  300
LVTVSGQAAK AYTGRKIQEE KVAEKEDGVG GSLALTNHDR EGKSKDQNHR KISIDDHSSG  360
GTDMGKASLD DSRPDCTDDQ KSSRPMSPGT LALMCDEQDA MFATSQNAVA PSAIDVDQNR  420
SELYAEQERC VLTEFRDCLR KLVQYGRMKE EKYSMAIRSE VTGHPGQVNG ALRIPYPKVD  480
VPVVKTFPQS SSKHLVAGNT SSGHLDKRLK PENT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-117	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG049970.6