PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG049870.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HB-other
Protein Properties Length: 146aa    MW: 15951.5 Da    PI: 9.0615
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG049870.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox70.71.7e-2290145156
                       TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
          Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                       r++ +++t+eq++++e++F+++++p++++r++L+k+lgL+ rqVk+WFqNrR++ k
  TRIDC3BG049870.5  90 RKSYHRHTSEQVRVMEAVFKESPHPDEKQRQQLSKQLGLSPRQVKFWFQNRRTQIK 145
                       788999**********************************************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    
MGSSRPRTKD FFAAPTLSLS LAGAFARNAP SGDEVEEGEE GSGGVRSGPP GEEVEISSEN  60
TGPAGSQSGD GSAEEEEGHG DGGKRKKRSR KSYHRHTSEQ VRVMEAVFKE SPHPDEKQRQ  120
QLSKQLGLSP RQVKFWFQNR RTQIKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79840.11e-29HD-ZIP family protein