PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG049040.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

VOZ

Protein Properties

Length: 561aa MW: 62833.5 Da PI: 6.6297

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG049040.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	420.3	3.1e-129	266	483	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalne.glpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwna 92 p+p++fl+pkcalwdc+rpaqgse++qdycs++ha+la++e g+pgt+pv+rp+gidlkdg+lfaalsak+qgk+vg+p+cegaat+kspwna TRIDC3BG049040.3 266 PAPASFLRPKCALWDCPRPAQGSERWQDYCSMYHAELAVKEeGPPGTMPVIRPRGIDLKDGPLFAALSAKIQGKHVGVPVCEGAATTKSPWNA 358 89***********************************9879********************************************** PP VOZ 93 aelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrl 185 +elfdl ++ege++rewlffdkprraf+sgnrkqrslpdy+grgwhesrkqvmk+fgglkrsyymdpqpsss+ewhlyeyein+ da+alyrl TRIDC3BG049040.3 359 PELFDLYIFEGESMREWLFFDKPRRAFDSGNRKQRSLPDYNGRGWHESRKQVMKDFGGLKRSYYMDPQPSSSYEWHLYEYEINDRDAFALYRL 451 ***************************************************************************************** PP VOZ 186 elklvdekksakgkvskdsladlqkklgrlta 217 e+k++++kksak+k ++++l ++q++++rl+a TRIDC3BG049040.3 452 EFKSSEAKKSAKSKFTCSPLIEIQQQMVRLSA 483 ****************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 561 aa Download sequence
RRRPPGHVLR PPVRPQGGPL HRRRPPRGAA PPDAPRVARR AQRPVPRLLP PGMSVPSSIP 60 LRFFVFCAVL FCRCLIGRLW SMARQENNNR DPSDPPSETP RPPQLAPAEE EDDATSKLVE 120 QKPRPSANQA HKHAQGDHDM KPEPHEEAIA DPVTVAQQPT SLGPGVVATG GEVLTPATAV 180 FHDQMYYVNQ ELSVEDFLYD DDYKINLPGS NPEILNNLEG IGHQEYLQFN LPQELPPNAY 240 LDMNNYGQNA GDGFLHMSDL LTTMSPAPAS FLRPKCALWD CPRPAQGSER WQDYCSMYHA 300 ELAVKEEGPP GTMPVIRPRG IDLKDGPLFA ALSAKIQGKH VGVPVCEGAA TTKSPWNAPE 360 LFDLYIFEGE SMREWLFFDK PRRAFDSGNR KQRSLPDYNG RGWHESRKQV MKDFGGLKRS 420 YYMDPQPSSS YEWHLYEYEI NDRDAFALYR LEFKSSEAKK SAKSKFTCSP LIEIQQQMVR 480 LSADGPVENK RTARARTQDV STNVYPVQNN TAQANAPDAY QAASQADQMT FLNGSVVYGP 540 HLPYGYSTEG GDFYWNSNDG A

Sequence ? help Back to Top

Protein Sequence Length: 561 aa Download sequence

RRRPPGHVLR PPVRPQGGPL HRRRPPRGAA PPDAPRVARR AQRPVPRLLP PGMSVPSSIP  60
LRFFVFCAVL FCRCLIGRLW SMARQENNNR DPSDPPSETP RPPQLAPAEE EDDATSKLVE  120
QKPRPSANQA HKHAQGDHDM KPEPHEEAIA DPVTVAQQPT SLGPGVVATG GEVLTPATAV  180
FHDQMYYVNQ ELSVEDFLYD DDYKINLPGS NPEILNNLEG IGHQEYLQFN LPQELPPNAY  240
LDMNNYGQNA GDGFLHMSDL LTTMSPAPAS FLRPKCALWD CPRPAQGSER WQDYCSMYHA  300
ELAVKEEGPP GTMPVIRPRG IDLKDGPLFA ALSAKIQGKH VGVPVCEGAA TTKSPWNAPE  360
LFDLYIFEGE SMREWLFFDK PRRAFDSGNR KQRSLPDYNG RGWHESRKQV MKDFGGLKRS  420
YYMDPQPSSS YEWHLYEYEI NDRDAFALYR LEFKSSEAKK SAKSKFTCSP LIEIQQQMVR  480
LSADGPVENK RTARARTQDV STNVYPVQNN TAQANAPDAY QAASQADQMT FLNGSVVYGP  540
HLPYGYSTEG GDFYWNSNDG A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-112	VOZ family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG049040.3