PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG048600.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HSF

Protein Properties

Length: 441aa MW: 49460.3 Da PI: 5.0231

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG048600.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	107.5	1.1e-33	13	103	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl+k+ye++++++++ ++ w+ +g+sfvvl + +f +++LpkyFkh+nf+SFvRQLn+YgF+kv+ e+ weF++++F +++++ l TRIDC3BG048600.2 13 FLTKTYEMVDEPATDAVVAWTPSGTSFVVLSQADFCRDLLPKYFKHNNFSSFVRQLNTYGFRKVDPEQ---------WEFANEEFIRDQRHRL 96 9*************************************************************9998.........************ PP XXXXXXX CS HSF_DNA-bind 95 ekikrkk 101 ++i+r+k TRIDC3BG048600.2 97 KNIHRRK 103 ***98 PP

Sequence ? help Back to Top
Protein Sequence Length: 441 aa Download sequence
MEGSGGSASL PPFLTKTYEM VDEPATDAVV AWTPSGTSFV VLSQADFCRD LLPKYFKHNN 60 FSSFVRQLNT YGFRKVDPEQ WEFANEEFIR DQRHRLKNIH RRKPIFSHSS HTQGAGPLAD 120 SERRDYDEEI ERLKCDNASL KLQLERKKTD MESKMKALED KLFAIEDQQK NLISYVREIV 180 NAPGFFSSFV EQSDHQGKKR RLPKPISFHE DTSTQGNQIM HCDLVNSPTH ELFRASFDKM 240 ESSLNSLENF FKEASEAFGN DVSYDGDVPG HSSAVVLTEL HSSAESEPLH SSAESEPHEQ 300 SPPSMMHTCS AGVGDSHSSR DIAESASCPE SPPLPEAHSR ADSRAKVSEI DVNLEPAVTE 360 TGPSRDQQPT QDPPADANDG FWQQFLTEQP GLSHAHQEAQ SERRDREANQ TTAGDRGSFW 420 WGKSVEQMTE KLGHLTSAEK T

Sequence ? help Back to Top

Protein Sequence Length: 441 aa Download sequence

MEGSGGSASL PPFLTKTYEM VDEPATDAVV AWTPSGTSFV VLSQADFCRD LLPKYFKHNN  60
FSSFVRQLNT YGFRKVDPEQ WEFANEEFIR DQRHRLKNIH RRKPIFSHSS HTQGAGPLAD  120
SERRDYDEEI ERLKCDNASL KLQLERKKTD MESKMKALED KLFAIEDQQK NLISYVREIV  180
NAPGFFSSFV EQSDHQGKKR RLPKPISFHE DTSTQGNQIM HCDLVNSPTH ELFRASFDKM  240
ESSLNSLENF FKEASEAFGN DVSYDGDVPG HSSAVVLTEL HSSAESEPLH SSAESEPHEQ  300
SPPSMMHTCS AGVGDSHSSR DIAESASCPE SPPLPEAHSR ADSRAKVSEI DVNLEPAVTE  360
TGPSRDQQPT QDPPADANDG FWQQFLTEQP GLSHAHQEAQ SERRDREANQ TTAGDRGSFW  420
WGKSVEQMTE KLGHLTSAEK T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45710.1	4e-79	HSF family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG048600.2