PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG048040.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | B3 | ||||||||
Protein Properties | Length: 380aa MW: 42319.9 Da PI: 10.401 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 66.8 | 3.1e-21 | 19 | 118 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 ffkvl +k+ rl +p kf++++ +g ke s+ tle +sgr+W+v + r++ +++++t+GW +Fv+++ L+e +f+vF++d TRIDC3BG048040.2 19 FFKVL--IGDFKK-RLKIPPKFCKHIpweasrkaKGLKEASMAATLEGPSGRTWQVVI--RRTAEGTFFTAGWAKFVQDQALRELEFLVFRHD 106 66666..555555.6********888********6666799*****************..*******************************99 PP SSSEE..EEEEE-S CS B3 86 grsefelvvkvfrk 99 g ++f +vf+k TRIDC3BG048040.2 107 GGTSF--AAMVFDK 118 87777..7777766 PP | |||||||
2 | B3 | 50.8 | 3e-16 | 280 | 366 | 5 | 98 |
-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 +++ +v s ++++p f ++h ++e+++++l+d+ g+ W +i ++++r l++GW F++ n L+egD +vF+l+g ef +v+vf TRIDC3BG048040.2 280 MSTMHVYYSFMMRFPTGFSRQHL--PREKTEMVLRDPGGKAWAALYI-PGTRDR--LSRGWCAFARGNCLEEGDCCVFELVGAAEF--RVHVF 365 6788999999*********9995..345679***************4.444445..9***********************997777..99999 PP - CS B3 98 r 98 r TRIDC3BG048040.2 366 R 366 8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 380 aa Download sequence |
MPDTERQSPW ASVERRPHFF KVLIGDFKKR LKIPPKFCKH IPWEASRKAK GLKEASMAAT 60 LEGPSGRTWQ VVIRRTAEGT FFTAGWAKFV QDQALRELEF LVFRHDGGTS FAAMVFDKSA 120 CEREDLLLAG DAPRPRRKRG RPRTASRAVD DSAGMELVPY RAPAEQLPQV ACSDRMPESD 180 KSNGTSLSGA GELPLCLIAP PPSESGQLPP GRLPAGTKDG CAVKTRSIHV DLAAASIPPS 240 VRKYNGYVSR RRPVASAERQ RAMELARAFR SSLPYCVIRM STMHVYYSFM MRFPTGFSRQ 300 HLPREKTEMV LRDPGGKAWA ALYIPGTRDR LSRGWCAFAR GNCLEEGDCC VFELVGAAEF 360 RVHVFRVVEP AVPAVRLRLA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 134 | 138 | RPRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18990.1 | 1e-26 | B3 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG048040.2 |