PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG047660.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MIKC_MADS
Protein Properties Length: 172aa    MW: 19849.8 Da    PI: 8.6079
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG047660.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF702.1e-22957149
                      S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
            SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                      kri+n ++rq tf kRr g++KKA EL vLCda+ ++++fs +gkly y
  TRIDC3BG047660.3  9 KRIDNPTQRQSTFYKRRDGLFKKARELAVLCDADLLLLLFSASGKLYQY 57
                      79*********************************************99 PP
2K-box30.81.2e-1172153182
             K-box   1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqk 82 
                       y++++++++++   ++ + el+k+ k  + L++e+R +  +d e+ s+  L  Le++Le ++ k+Rs K++ +  ++++l +
  TRIDC3BG047660.3  72 YEAATHTKVWSDIRQERRAELEKVAKMCDLLEKELRFMTVDDGEQYSVPSLAALEHNLEAAMHKVRSEKDRKIGGEMSYLEN 153
                       56677888***************************************************************99999988765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    
MGRGRSEIKR IDNPTQRQST FYKRRDGLFK KARELAVLCD ADLLLLLFSA SGKLYQYLAP  60
TVPSVKEFVE RYEAATHTKV WSDIRQERRA ELEKVAKMCD LLEKELRFMT VDDGEQYSVP  120
SLAALEHNLE AAMHKVRSEK DRKIGGEMSY LENMVSVRCT QGFGFCFERS LV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G20240.11e-23MIKC_MADS family protein