PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG045780.8
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HB-other
Protein Properties Length: 362aa    MW: 39581.3 Da    PI: 8.738
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG045780.8genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox29.61.2e-091211601352
                       HHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHH CS
          Homeobox  13 eeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrR 52 
                       + L+++Fek++yps+ ++e L ++lgLt  q++ WF   R
  TRIDC3BG045780.8 121 QKLKAYFEKEPYPSRPAKESLGQELGLTFHQITRWFSSTR 160
                       68**********************************8776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    
MEAELEQDSV LPASNRRQVG TLDYKKLYDE AYGKETTDSS DEKEWSGHSP NGNPEDSDTD  60
SFAGPLKPAK TRRARGGRQN NERTAQSERH SGSVSEQHPE VLSNGTSSTA RKKGYGPIVN  120
QKLKAYFEKE PYPSRPAKES LGQELGLTFH QITRWFSSTR HYSRVTATKK GKRSENYTAE  180
NNDGIAADSI QQREPNGSVL GKPNVDRNGI ISEERMAQKN LDEGEKEDTP FRQRISCEQT  240
LDGTPANKHN TANSREVDPP IGAPGGNQQS DTSRNAEDTP LGQDIGCEQT VAAINQNCTI  300
GSSNVGSPKG VPGGNKRLNN SPSVGSPRRG SAEKNIPGLE HVDEARRKAI LRELRKMKAA  360
GK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19510.15e-08HB-PHD family protein