PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG045530.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | Trihelix | ||||||||
Protein Properties | Length: 230aa MW: 25752.8 Da PI: 10.5445 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 46 | 1.4e-14 | 18 | 104 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ e+ aL++a ++ +l+rg+l++p+W+ev++++ ++r r+ +qCk++ + l+k+yk+++++ + s +p+f+ql+ TRIDC3BG045530.3 18 CWSEGETAALVDAWGSRYIDLNRGSLRQPQWREVADAVntrpgasARRRPPRTDIQCKNRVDTLKKKYKAERARGGP------SPWPFFRQLD 104 7*******************************************999999*********************999886......46******97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MDGKLPPPNP NLPYREDCWS EGETAALVDA WGSRYIDLNR GSLRQPQWRE VADAVNTRPG 60 ASARRRPPRT DIQCKNRVDT LKKKYKAERA RGGPSPWPFF RQLDVLVGPT LSAAAAKKPS 120 PPRALPMLRR RMSPSRSPSP PSPAPPMALP LPNYRRGSNL PAADLFHKAA AAAAAADSDS 180 DDGYNNNNNY DDDEGSSCSW RWWGRRWRQQ KEEGRGRRFW GASDGYGDIR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58630.1 | 3e-30 | Trihelix family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG045530.3 |