PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG045530.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | Trihelix | ||||||||
Protein Properties | Length: 319aa MW: 34701.2 Da PI: 10.3505 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 45.1 | 2.7e-14 | 18 | 104 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ e+ aL++a ++ +l+rg+l++p+W+ev++++ ++r r+ +qCk++ + l+k+yk+++++ + s +p+f+ql+ TRIDC3BG045530.2 18 CWSEGETAALVDAWGSRYIDLNRGSLRQPQWREVADAVntrpgasARRRPPRTDIQCKNRVDTLKKKYKAERARGGP------SPWPFFRQLD 104 7*******************************************999999*********************999886......46******97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 319 aa Download sequence |
MDGKLPPPNP NLPYREDCWS EGETAALVDA WGSRYIDLNR GSLRQPQWRE VADAVNTRPG 60 ASARRRPPRT DIQCKNRVDT LKKKYKAERA RGGPSPWPFF RQLDVLVGPT LSAAAAKKPS 120 PPRALPMLRR RMSPSRSPSP PSPAPPMALP LPNYRRGSNL PAADLFHKAA AAAAAADSDS 180 DDGYNNNNNY DDDEGSQQSA SRSVSSHSGG NGPPVLGGGG GGGGGNKRKR GGAGGFGELA 240 MAMETFAEMY ERMEAAKQRH AEEMEKQRIK FLKDLELKRM QAFVDMQLQL SRVKQAKNGT 300 SEMLMSLAAL PFLSNPAYL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58630.1 | 7e-30 | Trihelix family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG045530.2 |