PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG044630.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 223aa MW: 23428.3 Da PI: 7.0052 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 28.4 | 3.8e-09 | 9 | 35 | 18 | 46 |
HTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 18 qlGggtWktIartmgkgRtlkqcksrwqk 46 G++ W+ Ia++++ gRt++++k++w++ TRIDC3BG044630.2 9 SIGSR-WSIIASKLP-GRTDNDVKNYWNT 35 56889.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MVICSLYNSI GSRWSIIASK LPGRTDNDVK NYWNTKLKKK AMAMHQHQQQ QYHHHGSAGR 60 GHTGGATIAT PPPAPQSQCA SYMQPSPASA SSAVTTASGD AASFGAMYSP SHQAPLAHYN 120 VNAAAPLAEF SAMPMPAAAN SWAINMAFED MFLPELVGGG DFSQADLFGG FGASLLQAQD 180 SRASSLQELS ACYFPNVQAE MWAAAADHVN VKPPGAGLCP SLT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37780.1 | 5e-19 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG044630.2 |