PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG044000.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 313aa    MW: 33044.3 Da    PI: 11.9826
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG044000.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B397.86.7e-31154247187
                       EEEE-..-HHHHTT-EE--HHH.HTT........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 
                       f+k+ tpsdv+k++rlv+pk++ae+h        g  + ++  l +ed  g++W+++++y+++s++yvltkGW++Fvk++gL +gD+v F+++
  TRIDC3BG044000.3 154 FDKTVTPSDVGKLNRLVIPKQHAEKHfplqlpaaG-GESKGLLLNFEDAAGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKGLGAGDVVGFYRS 245
                       89*******************************53.456888*************************************************66 PP

                       SS CS
                B3  86 gr 87 
                         
  TRIDC3BG044000.3 246 AA 247
                       44 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
SSAWAAAPAP CSTRPSRAPR PTLAARAPAV RRRGSCRRPG SRAWCRSRTG GGARRSTSGT  60
SACGSARSPG RPTPRAPTTS PRSASAAATP SPTSARSRTP TPTPPPSSAS SPRAPRPRSS  120
TCCASTPTST SSPRASAPSP RRPRSPRPPP RHLFDKTVTP SDVGKLNRLV IPKQHAEKHF  180
PLQLPAAGGE SKGLLLNFED AAGKVWRFRY SYWNSSQSYV LTKGWSRFVK EKGLGAGDVV  240
GFYRSAAGST GEDTKLFIDC KLRPDTNSPA SADPVDQSAP VQKAVRLFGV DLLTAPASPE  300
QGMPGCKRAR DLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68840.21e-54RAV family protein