PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG042930.7
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 208aa    MW: 22536.7 Da    PI: 4.6355
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG042930.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.81.6e-15751147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      rg+++++E++ +v +++ lG++ W+ Ia++++ gRt++++k++w++ 
  TRIDC3BG042930.7  7 RGSFSQQEEDAIVGLHEILGNR-WSQIASHLP-GRTDNEIKNFWNSC 51
                      899*******************.*********.***********975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
LRPDLKRGSF SQQEEDAIVG LHEILGNRWS QIASHLPGRT DNEIKNFWNS CLKKKLRQRG  60
IDPSTHKPIS GVVGVEPDQA SKDERPQAAD GLALKQQQVF DPFPVADTFG AGFDGAGMPL  120
YDHLGGKDAA GFVDYSSVLD VSENLGYGES SSNSSNWNSA PEASNALEGE ALHWASESKV  180
EPFAGYAGDE DDKFALPCHG QQEHSMAH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15258LKKKLRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26660.17e-36MYB family protein