PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG042930.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 282aa    MW: 30770.1 Da    PI: 5.3699
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG042930.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.54.7e-161562148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g W++eEde+l++ + ++G g+W+++++  g+ R++k+c++rw +yl
  TRIDC3BG042930.5 15 KGLWSPEEDEKLYNHIIRYGVGCWSSVPKLAGLQRCGKSCRLRWINYL 62
                      678*******************************************97 PP
2Myb_DNA-binding48.12.7e-1568112147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       rg+++++E++ +v +++ lG++ W+ Ia++++ gRt++++k++w++ 
  TRIDC3BG042930.5  68 RGSFSQQEEDAIVGLHEILGNR-WSQIASHLP-GRTDNEIKNFWNSC 112
                       899*******************.*********.***********975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
AGTGGGGGVQ QKLRKGLWSP EEDEKLYNHI IRYGVGCWSS VPKLAGLQRC GKSCRLRWIN  60
YLRPDLKRGS FSQQEEDAIV GLHEILGNRW SQIASHLPGR TDNEIKNFWN SCLKKKLRQR  120
GIDPSTHKPI SGVVGVEPDQ ASKDERPQAA DGLALKQQQV FDPFPVADTF GAGFDGAGMP  180
LYDHLGGKDA AGFVDYSSVL DVSENLGYGE SSSNSSNWNS APEASNALEG EALHWASESK  240
VEPFAGYAGD EDDKFALPCH GQQEHSMISD CTLSIFSSLY YS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1113119LKKKLRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26660.13e-73MYB family protein