PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG042930.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 293aa    MW: 32112.6 Da    PI: 5.5754
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG042930.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.45e-161966148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g W++eEde+l++ + ++G g+W+++++  g+ R++k+c++rw +yl
  TRIDC3BG042930.2 19 KGLWSPEEDEKLYNHIIRYGVGCWSSVPKLAGLQRCGKSCRLRWINYL 66
                      678*******************************************97 PP
2Myb_DNA-binding482.8e-1572116147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       rg+++++E++ +v +++ lG++ W+ Ia++++ gRt++++k++w++ 
  TRIDC3BG042930.2  72 RGSFSQQEEDAIVGLHEILGNR-WSQIASHLP-GRTDNEIKNFWNSC 116
                       899*******************.*********.***********975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MGRHAGTGGG GGVQQKLRKG LWSPEEDEKL YNHIIRYGVG CWSSVPKLAG LQRCGKSCRL  60
RWINYLRPDL KRGSFSQQEE DAIVGLHEIL GNRWSQIASH LPGRTDNEIK NFWNSCLKKK  120
LRQRGIDPST HKPISGVVGV EPDQASKDER PQAADGLALK QQQVFDPFPV ADTFGAGFDG  180
AGMPLYDHLG GKDAAGFVDY SSVLDVSENL GYGESSSNSS NWNSAPEASN ALEGEALHWA  240
SESKVEPFAG YAGDEDDKFA LPCHGQQEHS MAHFDFNLET NREISDCTLS IFS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1117123LKKKLRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26660.16e-74MYB family protein