PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG042130.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 262aa MW: 28564.3 Da PI: 8.0619 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 37.6 | 5.3e-12 | 5 | 56 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47 +++WT eE+e l ++v ++G g W+tI + R+ ++k++w+++ TRIDC3BG042130.4 5 KQKWTSEEEEALRRGVLKHGAGKWRTIQKDPEfspvlSSRSNIDLKDKWRNL 56 79***********************************9************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 262 aa Download sequence |
MGAPKQKWTS EEEEALRRGV LKHGAGKWRT IQKDPEFSPV LSSRSNIDLK DKWRNLSFSA 60 SGLGSRDKQR VPRPKAPSSS PSPSPQLLLL PATNNVAEAS PPEDCEKSPQ DDKTPSPKYS 120 SMILEALGEL KEPNGSEVTT ICNFIEIDKS YKLTDSYAKR ALAPMKDPSL KKKDSAKSSK 180 AAKGQGLFTA ASPALGAAEA AATKVADAEA KSHLANEHMM EVERIGKMAE ETESLLELAS 240 ELYERCSRGE VLTILQVAHR EF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49950.1 | 4e-37 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG042130.4 |