PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG042130.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 263aa    MW: 28677.5 Da    PI: 8.0619
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG042130.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.65.3e-12556147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47
                      +++WT eE+e l ++v ++G g W+tI +          R+  ++k++w+++
  TRIDC3BG042130.2  5 KQKWTSEEEEALRRGVLKHGAGKWRTIQKDPEfspvlSSRSNIDLKDKWRNL 56
                      79***********************************9************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MGAPKQKWTS EEEEALRRGV LKHGAGKWRT IQKDPEFSPV LSSRSNIDLK DKWRNLSFSA  60
SGLGSRDKQR VPRPKAPSSS PSPSPQLLLL PATNNVAEAS PPEDCEKSPQ DDKTPSPKLY  120
SSMILEALGE LKEPNGSEVT TICNFIEIDK SYKLTDSYAK RALAPMKDPS LKKKDSAKSS  180
KAAKGQGLFT AASPALGAAE AAATKVADAE AKSHLANEHM MEVERIGKMA EETESLLELA  240
SELYERCSRG EVLTILQVAH REF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.16e-37MYB_related family protein