PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG042020.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 256aa MW: 27167.7 Da PI: 6.6491 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.2 | 1.6e-17 | 32 | 75 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++++eE+ l+vd+++ lG++ W+ Ia++++ gRt++++k++w++ TRIDC3BG042020.4 32 RGSFSQEEEALIVDLHRVLGNR-WAQIAKHLP-GRTDNEVKNFWNS 75 899*******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MCPSSFMRTG LQRCGKSCRL RWINYLRPDL KRGSFSQEEE ALIVDLHRVL GNRWAQIAKH 60 LPGRTDNEVK NFWNSTIKKK LISQAVGSLH SGNIPSSADL YYNILDGAGQ GIAAAGCASL 120 NGLDNAAQAV ATQPPPSSAA WLNFTSQPLL LPVHVPGCDL QYTVDGEFIR LCREAANACP 180 ENGASSLLAQ EGAADRSCLP VFAEPKGASA FATDPGMGPV ADFMDAILGS SSTSAASVSS 240 VDSFSANTGM QLHWVP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12720.1 | 3e-45 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG042020.4 |