PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG042020.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 249aa    MW: 26541 Da    PI: 6.6491
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG042020.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.31.5e-173275146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                      rg++++eE+ l+vd+++ lG++ W+ Ia++++ gRt++++k++w++
  TRIDC3BG042020.3 32 RGSFSQEEEALIVDLHRVLGNR-WAQIAKHLP-GRTDNEVKNFWNS 75
                      899*******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MCPSSFMRTG LQRCGKSCRL RWINYLRPDL KRGSFSQEEE ALIVDLHRVL GNRWAQIAKH  60
LPGRTDNEVK NFWNSTIKKK LISQAVGSLH SDLYYNILDG AGQGIAAAGC ASLNGLDNAA  120
QAVATQPPPS SAAWLNFTSQ PLLLPVHVPG CDLQYTVDGE FIRLCREAAN ACPENGASSL  180
LAQEGAADRS CLPVFAEPKG ASAFATDPGM GPVADFMDAI LGSSSTSAAS VSSVDSFSAN  240
TGMQLHWVP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12720.13e-45MYB family protein