PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC3BG041620.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 157aa MW: 17601.9 Da PI: 10.2923 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96.9 | 1.4e-30 | 72 | 130 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYG+K+vk+s++pr+YYrC+++gC+vkk+ver+++d ++v+++Yeg Hnh TRIDC3BG041620.2 72 LDDGYKWRKYGKKSVKNSPNPRNYYRCSTEGCSVKKRVERDKDDANYVVTMYEGVHNHA 130 59********************************************************6 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 157 aa Download sequence |
SSSWTSWTTC PTTAGCPARS ARRCRLRRRS CRMLATVIIR VGIVVDINFS RAAAVAASGK 60 IAFRTRSEEE ILDDGYKWRK YGKKSVKNSP NPRNYYRCST EGCSVKKRVE RDKDDANYVV 120 TMYEGVHNHA SPGTVYYASQ DPASGRFFVT GTHHLAP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G64810.1 | 1e-39 | WRKY family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC3BG041620.2 |