PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG041230.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 316aa MW: 35536.9 Da PI: 7.9852

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG041230.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	34.7	4.5e-11	59	151	1	85
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkr....tsessstcpyfdq 84 +Wt++ + aL++a e+ +r++l + W evs+ + r g s qC+++++ l+k ++k+ke+++ +++s s+++yfd+ TRIDC3BG041230.2 59 EWTEDSTFALLDAWGERFACDGRRSLSADEWLEVSRIVaaaasRPAG-YFSESQCRNRIDTLRKMFRKEKERSRLAahrsSNPSPSKWVYFDK 150 5***********************************888533333.35889**************9986522224677799***9 PP trihelix 85 l 85 + TRIDC3BG041230.2 151 M 151 9 PP

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence
LAQHMDHDAA AASPSASPSS SGASPSPRSK RRRTDRYALG FEFAPRSAPS APAPRTTPEW 60 TEDSTFALLD AWGERFACDG RRSLSADEWL EVSRIVAAAA SRPAGYFSES QCRNRIDTLR 120 KMFRKEKERS RLAAHRSSNP SPSKWVYFDK MLSLMCPPTP PPLLPPLTPL VTRRRDTHPV 180 PRRSWGVDVG ELVLAGCSKV VPGNSVPDAQ LREKQTYETG AVQGEEFAIL TEAIHRLREV 240 YERVESSRRQ HMAELNRMRK DMQRDLEVRR REILEKAQME IASLEEEDAK EGAVNNRLED 300 YNGVEEQNNG PLDASP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24490.1	1e-23	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG041230.2