PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG041070.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 1412aa MW: 159364 Da PI: 6.3805

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG041070.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.4	1e-17	3	57	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR t++ql++Le+ + ++yps+++r+eL+ k+gL++rq ++WF+ rR k++k TRIDC3BG041070.7 3 KRMMKTPYQLDVLEQTYLAEQYPSEAMRAELSVKIGLSDRQLQMWFCHRRLKDRK 57 79999************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1412 aa Download sequence
PVKRMMKTPY QLDVLEQTYL AEQYPSEAMR AELSVKIGLS DRQLQMWFCH RRLKDRKPPA 60 KRQRRDEEGP ATPVPVPPQV LPIQAMLLGS TDIMMSAGSP YDEPLLPPTH SRRGAGRSSA 120 VPRISAPDIG RRYYEPLSVM LPPPVAPMQF RQAELRVITS VESQLGEPLR EDGPVLGVDF 180 DPLPPGAFGA PIVPEQQKQP VRSYDAKIFS RHDPNLLKVS SFLPSMEHPF VPNSFAGKRK 240 SMVGNPPPQV HPHGGSRAVH EYQFLPEQPS DTYERASRSH YYDTPVEASN SRIPSLTPGP 300 HLLHVSEEMT PGYAFEGQGL LPQSGRPQVF SAVSTDYEMN QSNSNINSVP VDGQFGSSHV 360 AGFEDPLISS ETRAYHDEDA SRVDRKRKHN EEAKIAKEVE AHEKRIRKEL EKQDIMRRKR 420 EEQMRKEMER HDRERRKEEE RLLRERQREE ERFQREQRRE HERMEKFLQK QSRRAEKQRQ 480 KEELRKEKEM ARQKAANERA TARRIAREYM ELVEDERLEL MELAAQSKGL PSMLCLDSDT 540 LQQLDSFRGM LSHFPPEMVR LKAPLSIKPW TGSEESVGKL LMVWKFLITF ADVLELSSVT 600 LDEFIQSLHD YDSRLLGELH VALLKSIIKD IEDVARTPSV ALGVNPGGGH PQIVEGAYSW 660 GFNIRNWQRH LNLLTWPEIL RQFALSAGFG PQLKKRNAED VFYRDENEGQ DGQNVISALR 720 NGSAAVRAAA LMKERGYTHR RSRHRLTPGT VKFAAFHVLS LEDSSGLTIL EVAEKIQKSG 780 LRDLTTSKTP EASIAAALSR DTKLFERTAP STYCVKSPYR KDPADSEAVL SAAREKIRAF 840 QNVLSDSEAE KEVDDVDRDE ESDCDDDPDG DDVNIEVGDE KGPLLAVKAQ GVIPTATKVG 900 DVKGDPDDLD AALTQPISST TSRKDIAMLS LGDSSAVGTS SVSPLRASSD HPEVITGDPE 960 DTQIDESNQG ESWVQGLAEG DYCDLSVEER LNALVALVGV ATEGNSIRAV LEERLEAANA 1020 IKKQMWAEAQ LDKRRSKEEF ASKVQYNSYT SLKADVIPEN NATETTPTPV RNLDIDNDEN 1080 AGTSNNNEIL NQQNNAGIVS YERNGTGQET SATPDNLSAQ QYAYADKTRS QLKSYIGHRA 1140 EQLYVYRLLP LGQDRRRNRY WQFSTSTSPN DPGSGRIFFE SREGYWRVID SEEVFDALVA 1200 SLDTRGSREA QLHSMLQRVE STFKEGIKRK RDAAIEQSAG RYLKNGATDT MRASYRSEFG 1260 SPSSTHSSVS ADSATTYSDS FKIELGRNDV EKISISKRAD GFLKWMWSEC CDRQLTCAMK 1320 YGKKRCSALM HSCNYCYQIY LAEERHCSSC HKTFKSIYNY SEHTSQCDEK RRTDPNWKMQ 1380 IADYSVPIGM RLLKLQLATI EVKFLLVVCF SV

Sequence ? help Back to Top

Protein Sequence Length: 1412 aa Download sequence

PVKRMMKTPY QLDVLEQTYL AEQYPSEAMR AELSVKIGLS DRQLQMWFCH RRLKDRKPPA  60
KRQRRDEEGP ATPVPVPPQV LPIQAMLLGS TDIMMSAGSP YDEPLLPPTH SRRGAGRSSA  120
VPRISAPDIG RRYYEPLSVM LPPPVAPMQF RQAELRVITS VESQLGEPLR EDGPVLGVDF  180
DPLPPGAFGA PIVPEQQKQP VRSYDAKIFS RHDPNLLKVS SFLPSMEHPF VPNSFAGKRK  240
SMVGNPPPQV HPHGGSRAVH EYQFLPEQPS DTYERASRSH YYDTPVEASN SRIPSLTPGP  300
HLLHVSEEMT PGYAFEGQGL LPQSGRPQVF SAVSTDYEMN QSNSNINSVP VDGQFGSSHV  360
AGFEDPLISS ETRAYHDEDA SRVDRKRKHN EEAKIAKEVE AHEKRIRKEL EKQDIMRRKR  420
EEQMRKEMER HDRERRKEEE RLLRERQREE ERFQREQRRE HERMEKFLQK QSRRAEKQRQ  480
KEELRKEKEM ARQKAANERA TARRIAREYM ELVEDERLEL MELAAQSKGL PSMLCLDSDT  540
LQQLDSFRGM LSHFPPEMVR LKAPLSIKPW TGSEESVGKL LMVWKFLITF ADVLELSSVT  600
LDEFIQSLHD YDSRLLGELH VALLKSIIKD IEDVARTPSV ALGVNPGGGH PQIVEGAYSW  660
GFNIRNWQRH LNLLTWPEIL RQFALSAGFG PQLKKRNAED VFYRDENEGQ DGQNVISALR  720
NGSAAVRAAA LMKERGYTHR RSRHRLTPGT VKFAAFHVLS LEDSSGLTIL EVAEKIQKSG  780
LRDLTTSKTP EASIAAALSR DTKLFERTAP STYCVKSPYR KDPADSEAVL SAAREKIRAF  840
QNVLSDSEAE KEVDDVDRDE ESDCDDDPDG DDVNIEVGDE KGPLLAVKAQ GVIPTATKVG  900
DVKGDPDDLD AALTQPISST TSRKDIAMLS LGDSSAVGTS SVSPLRASSD HPEVITGDPE  960
DTQIDESNQG ESWVQGLAEG DYCDLSVEER LNALVALVGV ATEGNSIRAV LEERLEAANA  1020
IKKQMWAEAQ LDKRRSKEEF ASKVQYNSYT SLKADVIPEN NATETTPTPV RNLDIDNDEN  1080
AGTSNNNEIL NQQNNAGIVS YERNGTGQET SATPDNLSAQ QYAYADKTRS QLKSYIGHRA  1140
EQLYVYRLLP LGQDRRRNRY WQFSTSTSPN DPGSGRIFFE SREGYWRVID SEEVFDALVA  1200
SLDTRGSREA QLHSMLQRVE STFKEGIKRK RDAAIEQSAG RYLKNGATDT MRASYRSEFG  1260
SPSSTHSSVS ADSATTYSDS FKIELGRNDV EKISISKRAD GFLKWMWSEC CDRQLTCAMK  1320
YGKKRCSALM HSCNYCYQIY LAEERHCSSC HKTFKSIYNY SEHTSQCDEK RRTDPNWKMQ  1380
IADYSVPIGM RLLKLQLATI EVKFLLVVCF SV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44180.1	0.0	HB-other family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG041070.7