PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG041020.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 336aa    MW: 36499.8 Da    PI: 8.6927
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG041020.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM105.75.6e-33702101128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......lelee.vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk...... 79 
                       lp+G++F+Ptd+el+ e+L+ k++ ++      ++++  +i+   +i++++P++Lp  v ++    +fF++ +k+y+tg+rk+r+++      
  TRIDC3BG041020.5  70 LPAGVKFDPTDQELL-EHLEGKARLDTrklhplIDEFIpAIEGEnGICYTHPERLP-GVGKDGLIRHFFHRPSKAYTTGTRKRRKVHtdeqgg 160
                       799************.99**99988885565543333334766657**********.555555677******************744456555 PP

               NAM  80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                       + +W++tgk+++v++ +g+l+g kk+Lv+y   g+++k+ekt+Wvmh+y+l
  TRIDC3BG041020.5 161 ETRWHKTGKTRPVFT-EGKLKGYKKILVLYtnYGKQRKPEKTNWVMHQYHL 210
                       778************.999***********6657999999*********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MTWCNSFNDV RAVENNLASA AAVAAAAAKK QQHHQQQASS HVSLVRTCPA CGHHAQYEQA  60
AATIQDLPGL PAGVKFDPTD QELLEHLEGK ARLDTRKLHP LIDEFIPAIE GENGICYTHP  120
ERLPGVGKDG LIRHFFHRPS KAYTTGTRKR RKVHTDEQGG ETRWHKTGKT RPVFTEGKLK  180
GYKKILVLYT NYGKQRKPEK TNWVMHQYHL GSDEEEKDGE LVVSKVFYQT QPRQCGGSTA  240
AAVRDAAITA GNIITGGGAG ATSDHHRHHH EDGHNNNMLK EAAGMVDFYS PTAAALIGYS  300
SQAAPPNNRA AAAAAAASAH LMPNFEVHTG GTGFGP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.11e-118NAC family protein