PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG040640.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 235aa    MW: 25001.4 Da    PI: 10.6829
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG040640.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY106.61.2e-3343100259
                       --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                       +Dgy+WrKYGqK vk+s++prsYYrCt+++C vkk+vers +dp vv++tYeg+H+h+
  TRIDC3BG040640.3  43 EDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCVVKKRVERSFQDPAVVITTYEGKHTHP 100
                       8********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
AQCEPPKKPS SAAAKGGKAG KGEKRPRQPR FAFMTKSEVD HLEDGYRWRK YGQKAVKNSP  60
YPRSYYRCTT QKCVVKKRVE RSFQDPAVVI TTYEGKHTHP IPSALRGSTH LLAAQAAHLH  120
HQHHGHLGML PQMGMGGRAG SPFGRSSGGG IDVLGGLLQP RAPHGMTAPM AGAGAGHQAP  180
TQGLTGSIRS VASATATASS PPSLQMQHFM APDFGLLQDM LPSFIHGAGG NNDNQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29860.13e-50WRKY family protein