PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG040640.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WRKY

Protein Properties

Length: 367aa MW: 38575.1 Da PI: 8.4767

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG040640.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	105.6	2.6e-33	166	223	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s++prsYYrCt+++C vkk+vers +dp vv++tYeg+H+h+ TRIDC3BG040640.2 166 EDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCVVKKRVERSFQDPAVVITTYEGKHTHP 223 8********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MSGEFQFHDE LASLFTQRPG PGMQQQEQQA SWLADYLQTP MDYDLLCRAL ELPAAEDVVK 60 RELVVDTTPS GGALTPSGGG GTPNATSSMS SSSSEAGGGL CAGEGDSAGR CKKEDGDGED 120 GKGGDEGDKS KKGSAAAKGG KAGKGEKRPR QPRFAFMTKS EVDHLEDGYR WRKYGQKAVK 180 NSPYPRSYYR CTTQKCVVKK RVERSFQDPA VVITTYEGKH THPIPSALRG STHLLAAQAA 240 HLHHQHHGHL GMLPQMGMGG RAGSPFGRSS GGGIDVLGGL LQPRAPHGMT APMAGAGAGH 300 QAPTQGLTGS IRSVASATAT ASSPPSLQMQ HFMAPDFGLL QDMLPSFIHG AGGNNDNQPS 360 SPYGKLH

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MSGEFQFHDE LASLFTQRPG PGMQQQEQQA SWLADYLQTP MDYDLLCRAL ELPAAEDVVK  60
RELVVDTTPS GGALTPSGGG GTPNATSSMS SSSSEAGGGL CAGEGDSAGR CKKEDGDGED  120
GKGGDEGDKS KKGSAAAKGG KAGKGEKRPR QPRFAFMTKS EVDHLEDGYR WRKYGQKAVK  180
NSPYPRSYYR CTTQKCVVKK RVERSFQDPA VVITTYEGKH THPIPSALRG STHLLAAQAA  240
HLHHQHHGHL GMLPQMGMGG RAGSPFGRSS GGGIDVLGGL LQPRAPHGMT APMAGAGAGH  300
QAPTQGLTGS IRSVASATAT ASSPPSLQMQ HFMAPDFGLL QDMLPSFIHG AGGNNDNQPS  360
SPYGKLH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G29860.1	2e-49	WRKY family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG040640.2