PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG040350.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 93aa    MW: 10348.5 Da    PI: 5.1374
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG040350.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.86.6e-102064344
                      SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
   Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                      +W++ E +l+ +a + +G g   +W +++r mg ++t+ +++ ++
  TRIDC3BG040350.2 20 AWSAKENKLFEEALAYHGEGtpdRWLKVSRAMGGTKTADEVRRHY 64
                      6*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 93 aa     Download sequence    
IQVEMSSVSG SSSRGGDDAA WSAKENKLFE EALAYHGEGT PDRWLKVSRA MGGTKTADEV  60
RRHYEILLDD IKLIESGMVS FPKYKDNTQG PWN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.13e-20MYB_related family protein