PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG036770.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 197aa    MW: 21189 Da    PI: 10.0022
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG036770.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.51.5e-13125169347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +W++eE+ l++ + ++lG+g+W+ I+r   ++Rt+ q+ s+ qk+
  TRIDC3BG036770.1 125 PWSEEEHRLFLVGLEKLGKGDWRGISRSYVTTRTPTQVASHAQKF 169
                       8******************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MARKCSHCGN YGHNSRTCSS AGKQGEVMLC EGGGGSSSGS GLRLFGVQVH VAAGRSTGAG  60
ASMRKSYSMD CLQLAVAPSS IVSPSSSSSS SVLLSIDEGL ERASNGYLSD GPHGRLVQER  120
KKGVPWSEEE HRLFLVGLEK LGKGDWRGIS RSYVTTRTPT QVASHAQKFF LRQSSMGKKK  180
RRSSLFDMVL EYYILTC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1178182KKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.12e-49MYB_related family protein