PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC3BG036110.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 299aa MW: 32513.1 Da PI: 8.7803 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 43.4 | 7.8e-14 | 5 | 56 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47 ++rWT eE+ l+ +v+++G+g W+tI r g R+ ++k++w+++ TRIDC3BG036110.2 5 KQRWTSEEEAALKAGVAKHGPGKWRTILRDTGfsavlRLRSNVDLKDKWRNL 56 79***********************************99***********96 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 299 aa Download sequence |
MGAPKQRWTS EEEAALKAGV AKHGPGKWRT ILRDTGFSAV LRLRSNVDLK DKWRNLSVTA 60 GGYGSREKAR MALKQGKRVP KVNIEPMDVD ADNLDNVHDT VIDAKPLAVV VEPSQRECSS 120 EKSVARLVLD DLILEAIKKL KESSGSNKTA IASYIEEQYW PPADFQRLLS TKLKALVATG 180 KLMKSNQKYR IAPSSVSLGG RSTKVHSTED DKQNICIRQL TKPQVDAELD MMTHMNKEEA 240 AAFAAKAVAE AEVANAEAEE AARAAEAAEA EAEAAKAFLD AVMLTVQNKN AASAILRAC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G49950.1 | 2e-66 | MYB_related family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC3BG036110.2 |