PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG036110.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 297aa    MW: 32300.8 Da    PI: 8.7803
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG036110.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.47.7e-14556147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47
                      ++rWT eE+  l+ +v+++G+g W+tI r  g       R+  ++k++w+++
  TRIDC3BG036110.1  5 KQRWTSEEEAALKAGVAKHGPGKWRTILRDTGfsavlRLRSNVDLKDKWRNL 56
                      79***********************************99***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MGAPKQRWTS EEEAALKAGV AKHGPGKWRT ILRDTGFSAV LRLRSNVDLK DKWRNLSVTA  60
GGYGSREKAR MALKQGKRVP KVNIEPMDVD ADNLDNVHDT VIDAKPLAVV VEPSQRECSS  120
EKSVARLDDL ILEAIKKLKE SSGSNKTAIA SYIEEQYWPP ADFQRLLSTK LKALVATGKL  180
MKSNQKYRIA PSSVSLGGRS TKVHSTEDDK QNICIRQLTK PQVDAELDMM THMNKEEAAA  240
FAAKAVAEAE VANAEAEEAA RAAEAAEAEA EAAKAFLDAV MLTVQNKNAA SAILRAC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.11e-67MYB_related family protein