PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG035480.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 153aa MW: 17620.6 Da PI: 8.3288 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 42.3 | 1.3e-13 | 3 | 48 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h + Er+RR+++N++f++Lr+llP++ K +K ++L+kA Y+k L+ TRIDC3BG035480.3 3 HMMSERKRREKLNDSFHTLRSLLPPC-----SKKDKTTVLTKAAGYLKTLE 48 6789*********************9.....699**************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 153 aa Download sequence |
LYHMMSERKR REKLNDSFHT LRSLLPPCSK KDKTTVLTKA AGYLKTLEAQ VSELEEKNNK 60 LEKHIPTYDC EEDVPHHQRR QRAKVQITKA ASDEVVNLTV MVMVECDVVE LVLRILECLR 120 WMEQVSVMSV DADTYSPQVL LKAIASIKLR IVG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 7 | 12 | ERKRRE |
2 | 8 | 13 | RKRREK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56960.1 | 1e-19 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG035480.3 |