PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG032640.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 307aa MW: 34010.9 Da PI: 5.2214 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.6 | 2.4e-17 | 20 | 67 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l++ + ++G+g+W++++r g+ R++k+c++rw +yl TRIDC3BG032640.4 20 RGLWSPEEDEKLYNHIIRYGNGCWSSVPRLAGLERCGKSCRLRWINYL 67 788*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.3 | 5.6e-16 | 73 | 116 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E++l+v ++k lG++ W+ Ia+ ++ gRt++++k++w++ TRIDC3BG032640.4 73 RGSFSQQEEDLIVSLHKILGNR-WSQIASQLP-GRTDNEIKNFWNS 116 899*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 307 aa Download sequence |
MGREAAAAVA CSSNKPKLRR GLWSPEEDEK LYNHIIRYGN GCWSSVPRLA GLERCGKSCR 60 LRWINYLRPD LKRGSFSQQE EDLIVSLHKI LGNRWSQIAS QLPGRTDNEI KNFWNSCIKK 120 KLRQQRIDPT THESLNDAAA VAEPHDKCKQ LVPAAEDGCF GGSVGSDDFL APHSPVDCSF 180 DPMSVTNVPA MRMQGSYSLC DYAGVGSDAT TYSAYTGGGD SSSNSNGTGT GTWTCGNVEP 240 LPHMDMFRDD AEPYPFDPTK FSPWHQQQPP DDDRGSAVFP IRSLSRDLPE SCFELARGAL 300 EDEFDFM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G26660.1 | 4e-70 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG032640.4 |