PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG032610.7 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | C3H | ||||||||
Protein Properties | Length: 113aa MW: 12734.4 Da PI: 4.4791 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 35.5 | 1.6e-11 | 72 | 96 | 1 | 26 |
--S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26 +ktelC+ + G C+yG+rC+FaHg TRIDC3BG032610.7 72 QKTELCNKWEG-GACSYGGRCRFAHG 96 69*******98.*************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 113 aa Download sequence |
MDFFRILENV FSVWFRLNCC PTVPAEPPNV LCLRCAFFQL LYWFSLHTDA GEDEAKGDGE 60 VVELEAYRQG TQKTELCNKW EGGACSYGGR CRFAHGLQDD GFLISLTNQG VQG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66810.1 | 6e-15 | C3H family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG032610.7 |