PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG031020.9

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 726aa MW: 80172.3 Da PI: 4.9939

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG031020.9	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.7	1.5e-19	25	71	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd+++v+ vk++G++ W+tIa+ ++ gR +kqc++rw+++l TRIDC3BG031020.9 25 KGPWSKEEDDIIVEMVKKYGPKKWSTIAQALP-GRIGKQCRERWHNHL 71 79****************************.***********97 PP
2	Myb_DNA-binding	49.6	9.4e-16	77	119	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT+eE+ l++a++++G++ W+ + ++ gRt++++k++w+ TRIDC3BG031020.9 77 KDAWTQEEEITLIHAHRMYGNK-WAELTKFLP-GRTDNSIKNHWN 119 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 726 aa Download sequence
ECFPDRTDVQ CLHRWQKVLN PELIKGPWSK EEDDIIVEMV KKYGPKKWST IAQALPGRIG 60 KQCRERWHNH LNPGINKDAW TQEEEITLIH AHRMYGNKWA ELTKFLPGRT DNSIKNHWNS 120 SVKKKIDSYM SSGLLAQVSR LPLIEHHAHF NSSPAITQQN SEDSDSNAVR EVEDSSGCSQ 180 SSLAMVSCSQ VQDTNLALSC DLHVNADTSK TEARDSQSSM CQEDYTSTEG AASALSEVHC 240 HASSSRFGPD KLLQQDISQR MNLQMDIDEI PGNSMFENNQ TICSTSNNER PMLQYEIAPD 300 MPISVLTNVS GAEQKLHFMS EADFSSPNCL KSELWQEISF QSLLSGPDIV DADSLSRLNH 360 HSDTHSSEAD TNFLAAPNPS HTSNPSSMMV AAYGQDPSLS VPQSLISNGL SDAADEKSGE 420 MQVSGSEMIT CMHDSFGDSE QFATPGSTDG RHGASAIIER IPEYGDKQLT DAEEPAASMA 480 KEPPLAQGEA ASDEKQDKGA LFYEPPRFPS MDVPFVSCDL VTSGDLQEYS PLGIRQLMRS 540 TMSVTTPLRL WGSPTHDESP DVVLKSAAKS FISTPSILKK RPRDLSSPTP EKRMERKSRT 600 EQDSGVLGTS SVSAQTSCMH AIKDKAIVTE SVLCTNRSSS FKPLEKKLEF CDENKEILGE 660 SEQAKDGRNA QNNHTVDEHA RGEQCSTANM VNTNDEAGAK CHLQLFLLNT RTMTFLIMAQ 720 MPCIRK

Sequence ? help Back to Top

Protein Sequence Length: 726 aa Download sequence

ECFPDRTDVQ CLHRWQKVLN PELIKGPWSK EEDDIIVEMV KKYGPKKWST IAQALPGRIG  60
KQCRERWHNH LNPGINKDAW TQEEEITLIH AHRMYGNKWA ELTKFLPGRT DNSIKNHWNS  120
SVKKKIDSYM SSGLLAQVSR LPLIEHHAHF NSSPAITQQN SEDSDSNAVR EVEDSSGCSQ  180
SSLAMVSCSQ VQDTNLALSC DLHVNADTSK TEARDSQSSM CQEDYTSTEG AASALSEVHC  240
HASSSRFGPD KLLQQDISQR MNLQMDIDEI PGNSMFENNQ TICSTSNNER PMLQYEIAPD  300
MPISVLTNVS GAEQKLHFMS EADFSSPNCL KSELWQEISF QSLLSGPDIV DADSLSRLNH  360
HSDTHSSEAD TNFLAAPNPS HTSNPSSMMV AAYGQDPSLS VPQSLISNGL SDAADEKSGE  420
MQVSGSEMIT CMHDSFGDSE QFATPGSTDG RHGASAIIER IPEYGDKQLT DAEEPAASMA  480
KEPPLAQGEA ASDEKQDKGA LFYEPPRFPS MDVPFVSCDL VTSGDLQEYS PLGIRQLMRS  540
TMSVTTPLRL WGSPTHDESP DVVLKSAAKS FISTPSILKK RPRDLSSPTP EKRMERKSRT  600
EQDSGVLGTS SVSAQTSCMH AIKDKAIVTE SVLCTNRSSS FKPLEKKLEF CDENKEILGE  660
SEQAKDGRNA QNNHTVDEHA RGEQCSTANM VNTNDEAGAK CHLQLFLLNT RTMTFLIMAQ  720
MPCIRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.1	2e-84	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG031020.9