PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG031020.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 932aa MW: 102633 Da PI: 4.9248

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG031020.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	42.2	1.9e-13	7	46	8	48
HHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 8 EdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 Ed++l +av+ + g++Wk+Ia++++ Rt+ qc +rwqk+l TRIDC3BG031020.7 7 EDDILSRAVQTYNGKNWKKIAECFP-DRTDVQCLHRWQKVL 46 9**********************.**********986 PP
2	Myb_DNA-binding	61.3	2.1e-19	52	98	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd+++v+ vk++G++ W+tIa+ ++ gR +kqc++rw+++l TRIDC3BG031020.7 52 KGPWSKEEDDIIVEMVKKYGPKKWSTIAQALP-GRIGKQCRERWHNHL 98 79****************************.***********97 PP
3	Myb_DNA-binding	49.1	1.3e-15	104	146	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT+eE+ l++a++++G++ W+ + ++ gRt++++k++w+ TRIDC3BG031020.7 104 KDAWTQEEEITLIHAHRMYGNK-WAELTKFLP-GRTDNSIKNHWN 146 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 932 aa Download sequence
KLDPRREDDI LSRAVQTYNG KNWKKIAECF PDRTDVQCLH RWQKVLNPEL IKGPWSKEED 60 DIIVEMVKKY GPKKWSTIAQ ALPGRIGKQC RERWHNHLNP GINKDAWTQE EEITLIHAHR 120 MYGNKWAELT KFLPGRTDNS IKNHWNSSVK KKIDSYMSSG LLAQVSRLPL IEHHAHFNSS 180 PAITQQNSED SDSNAVREVE DSSGCSQSSL AMVSCSQVQD TNLALSCDLH VNADTSKTEA 240 RDSQSSMCQE DYTSTEGAAS ALSEVHCHAS SSRFGPDKLL QQDISQRMNL QMDIDEIPGN 300 SMFENNQTIC STSNNERPML QYEIAPDMPI SVLTNVSGAE QKLHFMSEAD FSSPNCLKSE 360 LWQEISFQSL LSGPDIVDAD SLSRLNHHSD THSSEADTNF LAAPNPSHTS NPSSMMVAAY 420 GQDPSLSVPQ SLISNGLSDA ADEKSGEMQV SGSEMITCMH DSFGDSEQFA TPGSTDGRHG 480 ASAIIERIPE YGDKQLTDAE EPAASMAKEP PLAQGEAASD EKQDKGALFY EPPRFPSMDV 540 PFVSCDLVTS GDLQEYSPLG IRQLMRSTMS VTTPLRLWGS PTHDESPDVV LKSAAKSFIS 600 TPSILKKRPR DLSSPTPEKR MERKSRTEQD SGVLGTSSVS AQTSCMHAIK DKAIVTESVL 660 CTNRSSSFKP LEKKLEFCDE NKEILGESEQ AKDGRNAQNN HTVDEHARGE QCSTANMVNT 720 NDEPPATVLV EHKDNDISDH GANAMYQKMN TNLEALSACK EAFAKSKSGE LIAEKSSPCI 780 QMDYEYVNIL ADTPGVKRGL ESPSAWKSPW FIDMQYKGSY FISPADTTYD ALGLMKRINV 840 QSASALADAR EVLASGSQCG NKIFDEENKE NIDAENETGT GKPQNKIMAE ARVLDFNECA 900 TPVRTADNSV GGSLTKSVSS PIPSSHLLKN FR

Sequence ? help Back to Top

Protein Sequence Length: 932 aa Download sequence

KLDPRREDDI LSRAVQTYNG KNWKKIAECF PDRTDVQCLH RWQKVLNPEL IKGPWSKEED  60
DIIVEMVKKY GPKKWSTIAQ ALPGRIGKQC RERWHNHLNP GINKDAWTQE EEITLIHAHR  120
MYGNKWAELT KFLPGRTDNS IKNHWNSSVK KKIDSYMSSG LLAQVSRLPL IEHHAHFNSS  180
PAITQQNSED SDSNAVREVE DSSGCSQSSL AMVSCSQVQD TNLALSCDLH VNADTSKTEA  240
RDSQSSMCQE DYTSTEGAAS ALSEVHCHAS SSRFGPDKLL QQDISQRMNL QMDIDEIPGN  300
SMFENNQTIC STSNNERPML QYEIAPDMPI SVLTNVSGAE QKLHFMSEAD FSSPNCLKSE  360
LWQEISFQSL LSGPDIVDAD SLSRLNHHSD THSSEADTNF LAAPNPSHTS NPSSMMVAAY  420
GQDPSLSVPQ SLISNGLSDA ADEKSGEMQV SGSEMITCMH DSFGDSEQFA TPGSTDGRHG  480
ASAIIERIPE YGDKQLTDAE EPAASMAKEP PLAQGEAASD EKQDKGALFY EPPRFPSMDV  540
PFVSCDLVTS GDLQEYSPLG IRQLMRSTMS VTTPLRLWGS PTHDESPDVV LKSAAKSFIS  600
TPSILKKRPR DLSSPTPEKR MERKSRTEQD SGVLGTSSVS AQTSCMHAIK DKAIVTESVL  660
CTNRSSSFKP LEKKLEFCDE NKEILGESEQ AKDGRNAQNN HTVDEHARGE QCSTANMVNT  720
NDEPPATVLV EHKDNDISDH GANAMYQKMN TNLEALSACK EAFAKSKSGE LIAEKSSPCI  780
QMDYEYVNIL ADTPGVKRGL ESPSAWKSPW FIDMQYKGSY FISPADTTYD ALGLMKRINV  840
QSASALADAR EVLASGSQCG NKIFDEENKE NIDAENETGT GKPQNKIMAE ARVLDFNECA  900
TPVRTADNSV GGSLTKSVSS PIPSSHLLKN FR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.1	6e-94	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG031020.7