PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG031020.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 982aa MW: 107862 Da PI: 5.1211

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG031020.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.7	6.4e-19	50	96	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l +av+ + g++Wk+Ia++++ Rt+ qc +rwqk+l TRIDC3BG031020.3 50 KGNWTPEEDDILSRAVQTYNGKNWKKIAECFP-DRTDVQCLHRWQKVL 96 79****************************.**********986 PP
2	Myb_DNA-binding	61.2	2.2e-19	102	148	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd+++v+ vk++G++ W+tIa+ ++ gR +kqc++rw+++l TRIDC3BG031020.3 102 KGPWSKEEDDIIVEMVKKYGPKKWSTIAQALP-GRIGKQCRERWHNHL 148 79****************************.***********97 PP
3	Myb_DNA-binding	49.1	1.3e-15	154	196	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT+eE+ l++a++++G++ W+ + ++ gRt++++k++w+ TRIDC3BG031020.3 154 KDAWTQEEEITLIHAHRMYGNK-WAELTKFLP-GRTDNSIKNHWN 196 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 982 aa Download sequence
MTSDKGKASK KAGEASGQPS TTHEGKVSNE PQRQRSLNGR TTGPTRRSTK GNWTPEEDDI 60 LSRAVQTYNG KNWKKIAECF PDRTDVQCLH RWQKVLNPEL IKGPWSKEED DIIVEMVKKY 120 GPKKWSTIAQ ALPGRIGKQC RERWHNHLNP GINKDAWTQE EEITLIHAHR MYGNKWAELT 180 KFLPGRTDNS IKNHWNSSVK KKIDSYMSSG LLAQVSRLPL IEHHAHFNSS PAITQQNSED 240 SDSNAVREVE DSSGCSQSSL AMVSCSQVQD TNLALSCDLH VNADTSKTEA RDSQSSMCQE 300 DYTSTEGAAS ALSEVHCHAS SSRFGPDKLL QQDISQRMNL QMDIDEIPGN SMFENNQTIC 360 STSNNERPML QYEIAPDMPI SVLTNVSGAE QKLHFMSEAD FSSPNCLKSE LWQEISFQSL 420 LSGPDIVDAD SLSRLNHHSD THSSEADTNF LAAPNPSHTS NPSSMMVAAY GQDPSLSVPQ 480 SLISNGLSDA ADEKSGEMQV SGSEMITCMH DSFGDSEQFA TPGSTDGRHG ASAIIERIPE 540 YGDKQLTDAE EPAASMAKEP PLAQGEAASD EKQDKGALFY EPPRFPSMDV PFVSCDLVTS 600 GDLQEYSPLG IRQLMRSTMS VTTPLRLWGS PTHDESPDVV LKSAAKSFIS TPSILKKRPR 660 DLSSPTPEKR MERKSRTEQD SGVLGTSSVS AQTSCMHAIK DKAIVTESVL CTNRSSSFKP 720 LEKKLEFCDE NKEILGESEQ AKDGRNAQNN HTVDEHARGE QCSTANMVNT NDEPPATVLV 780 EHKDNDISDH GANAMYQKMN TNLEALSACK EAFAKSKSGE LIAEKSSPCI QMDYEYVNIL 840 ADTPGVKRGL ESPSAWKSPW FIDMQYKGSY FISPADTTYD ALGLMKRINV QSASALADAR 900 EVLASGSQCG NKIFDEENKE NIDAENETGT GKPQNKIMAE ARVLDFNECA TPVRTADNSV 960 GGSLTKSVSS PIPSSHLLKN FR

Sequence ? help Back to Top

Protein Sequence Length: 982 aa Download sequence

MTSDKGKASK KAGEASGQPS TTHEGKVSNE PQRQRSLNGR TTGPTRRSTK GNWTPEEDDI  60
LSRAVQTYNG KNWKKIAECF PDRTDVQCLH RWQKVLNPEL IKGPWSKEED DIIVEMVKKY  120
GPKKWSTIAQ ALPGRIGKQC RERWHNHLNP GINKDAWTQE EEITLIHAHR MYGNKWAELT  180
KFLPGRTDNS IKNHWNSSVK KKIDSYMSSG LLAQVSRLPL IEHHAHFNSS PAITQQNSED  240
SDSNAVREVE DSSGCSQSSL AMVSCSQVQD TNLALSCDLH VNADTSKTEA RDSQSSMCQE  300
DYTSTEGAAS ALSEVHCHAS SSRFGPDKLL QQDISQRMNL QMDIDEIPGN SMFENNQTIC  360
STSNNERPML QYEIAPDMPI SVLTNVSGAE QKLHFMSEAD FSSPNCLKSE LWQEISFQSL  420
LSGPDIVDAD SLSRLNHHSD THSSEADTNF LAAPNPSHTS NPSSMMVAAY GQDPSLSVPQ  480
SLISNGLSDA ADEKSGEMQV SGSEMITCMH DSFGDSEQFA TPGSTDGRHG ASAIIERIPE  540
YGDKQLTDAE EPAASMAKEP PLAQGEAASD EKQDKGALFY EPPRFPSMDV PFVSCDLVTS  600
GDLQEYSPLG IRQLMRSTMS VTTPLRLWGS PTHDESPDVV LKSAAKSFIS TPSILKKRPR  660
DLSSPTPEKR MERKSRTEQD SGVLGTSSVS AQTSCMHAIK DKAIVTESVL CTNRSSSFKP  720
LEKKLEFCDE NKEILGESEQ AKDGRNAQNN HTVDEHARGE QCSTANMVNT NDEPPATVLV  780
EHKDNDISDH GANAMYQKMN TNLEALSACK EAFAKSKSGE LIAEKSSPCI QMDYEYVNIL  840
ADTPGVKRGL ESPSAWKSPW FIDMQYKGSY FISPADTTYD ALGLMKRINV QSASALADAR  900
EVLASGSQCG NKIFDEENKE NIDAENETGT GKPQNKIMAE ARVLDFNECA TPVRTADNSV  960
GGSLTKSVSS PIPSSHLLKN FR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.1	1e-106	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG031020.3