PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG029830.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 297aa MW: 32158.8 Da PI: 9.1232

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG029830.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.8	1.9e-16	57	102	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v q+G+ +W++Ia+++ gR++k+c++rw++ TRIDC3BG029830.3 57 RGHWRPAEDARLKELVGQYGPQNWNLIAEKLD-GRSGKSCRLRWFNQ 102 899***************************.*********996 PP
2	Myb_DNA-binding	56.1	8.4e-18	109	153	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r ++T+eE+++l a++ +G++ W++Iar ++ gRt++ +k++w+ + TRIDC3BG029830.3 109 RRAFTEEEEDRLMAAHRAYGNK-WALIARLFP-GRTDNAVKNHWHVL 153 678*****************.*****.*********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence
FALLSSSVTT HPPAPRLLSG FFSHPPPPPP APYQEEAAAD VDDAEDGGGG QGKLCSRGHW 60 RPAEDARLKE LVGQYGPQNW NLIAEKLDGR SGKSCRLRWF NQLDPRINRR AFTEEEEDRL 120 MAAHRAYGNK WALIARLFPG RTDNAVKNHW HVLMARRQRE QSGAFRRRTK PASASSSSSI 180 APAPHYAGVV LQHQHQYQHH GASPIPMPLQ PFAMGVAIAT GMYSKAATAT ASRAYSGGES 240 DESASTCTTD LSLSSGNAAV PCFYHHQGYD MAPQAHAVTQ AFSPSARSAF SAPSSSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	9e-71	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG029830.3