PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG029830.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 304aa MW: 33117.6 Da PI: 8.8752

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG029830.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.7	2e-16	49	94	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v q+G+ +W++Ia+++ gR++k+c++rw++ TRIDC3BG029830.2 49 RGHWRPAEDARLKELVGQYGPQNWNLIAEKLD-GRSGKSCRLRWFNQ 94 899***************************.*********996 PP
2	Myb_DNA-binding	56.1	8.7e-18	101	145	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r ++T+eE+++l a++ +G++ W++Iar ++ gRt++ +k++w+ + TRIDC3BG029830.2 101 RRAFTEEEEDRLMAAHRAYGNK-WALIARLFP-GRTDNAVKNHWHVL 145 678*****************.*****.*********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 304 aa Download sequence
RERPRMAREM NGFFSHPPPP PPAPYQEEAA ADVDDAEDGG GGQGKLCSRG HWRPAEDARL 60 KELVGQYGPQ NWNLIAEKLD GRSGKSCRLR WFNQLDPRIN RRAFTEEEED RLMAAHRAYG 120 NKWALIARLF PGRTDNAVKN HWHVLMARRQ REQSGAFRRR TKPASASSSS SIAPAPHYAG 180 VVLQHQHHKA ATATASRAYS GGESDESAST CTTDLSLSSG NAAVPCFYHH QAPSCCCFVA 240 SSVVSPPHGH GHGHGQHFDP SPTDMVVFGA GYDMAPQAHA VTQAFSPSAR SAFSAPSSSS 300 ARRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	6e-70	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG029830.2