PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG027650.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 138aa    MW: 14492.3 Da    PI: 7.56
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG027650.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH28.13.5e-093961527
                      --SGGGGTS--TTTTT-SS-SSS CS
           zf-CCCH  5 lCrffartGtCkyGdrCkFaHgp 27
                       C++f rtGtCk+Gd C++ H++
  TRIDC3BG027650.2 39 VCNHFVRTGTCKFGDACRYFHPK 61
                      6********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 138 aa     Download sequence    
LARPLPFLTL NLNPSSSAES HGGASPLLQP DGAILGQGVC NHFVRTGTCK FGDACRYFHP  60
KPHAVNPAFA PSGPVPGAMG QQSNFLGTQP NFVGYQAMEG NSFSGNILRG HTSWGNLPPS  120
LQPPPEGGYP PLPFVDWG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18550.14e-09C3H family protein