PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG027380.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GeBP

Protein Properties

Length: 400aa MW: 42061.1 Da PI: 4.7693

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG027380.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	100.9	1.1e-31	77	176	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkife 90 lfqrlw++e e+++L+G++df++++g+ +++ d+ fye +++++sf++sk+ql+eK+rrLKkK++ + ++ a++g ++f+++h+ i++ TRIDC3BG027380.3 77 LFQRLWTDEEELLILRGFLDFTSRRGTafASHQyDTGPFYEEIRRKLSFDFSKNQLIEKLRRLKKKYRVCATRmAAQGAAFAFKSAHEGAIYD 169 79**********************99877778**********************************9889************* PP DUF573 91 lskkiWg 97 +++ iW+ TRIDC3BG027380.3 170 VARHIWR 176 ****8 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
RPATMADDPA SAAPSSADQD EEGTDSDASN DSHPPAAQEA PPPPFPDTSA PAFPEPAGPV 60 PPQGASAAAA AEDSRRLFQR LWTDEEELLI LRGFLDFTSR RGTAFASHQY DTGPFYEEIR 120 RKLSFDFSKN QLIEKLRRLK KKYRVCATRM AAQGAAFAFK SAHEGAIYDV ARHIWRPAFK 180 RDGAGGDASD EDDINPAEAA AVAAAAAATA AAAAATEIPA AVEEGGGGGA SAHTPRGRGS 240 RRGGRKRMAQ EIEAPTFPAT PAPMLTDAAQ EQAIVAFESS VPVIAQPPSV PAAPLPPYPL 300 TANGPTEADV RSILSPLLKE LISSVAVPGQ TGLGLGLGMG FGGADILGVG LGVAGLSPRV 360 PGDEKWRQQQ ILELEVYLKR LELVREQVMT VLQELRSSES

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

RPATMADDPA SAAPSSADQD EEGTDSDASN DSHPPAAQEA PPPPFPDTSA PAFPEPAGPV  60
PPQGASAAAA AEDSRRLFQR LWTDEEELLI LRGFLDFTSR RGTAFASHQY DTGPFYEEIR  120
RKLSFDFSKN QLIEKLRRLK KKYRVCATRM AAQGAAFAFK SAHEGAIYDV ARHIWRPAFK  180
RDGAGGDASD EDDINPAEAA AVAAAAAATA AAAAATEIPA AVEEGGGGGA SAHTPRGRGS  240
RRGGRKRMAQ EIEAPTFPAT PAPMLTDAAQ EQAIVAFESS VPVIAQPPSV PAAPLPPYPL  300
TANGPTEADV RSILSPLLKE LISSVAVPGQ TGLGLGLGMG FGGADILGVG LGVAGLSPRV  360
PGDEKWRQQQ ILELEVYLKR LELVREQVMT VLQELRSSES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	8e-29	GeBP family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG027380.3