PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG027380.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GeBP

Protein Properties

Length: 376aa MW: 39941.7 Da PI: 4.8132

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG027380.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	101.1	9.8e-32	73	172	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkife 90 lfqrlw++e e+++L+G++df++++g+ +++ d+ fye +++++sf++sk+ql+eK+rrLKkK++ + ++ a++g ++f+++h+ i++ TRIDC3BG027380.2 73 LFQRLWTDEEELLILRGFLDFTSRRGTafASHQyDTGPFYEEIRRKLSFDFSKNQLIEKLRRLKKKYRVCATRmAAQGAAFAFKSAHEGAIYD 165 79**********************99877778**********************************9889************* PP DUF573 91 lskkiWg 97 +++ iW+ TRIDC3BG027380.2 166 VARHIWR 172 ****8 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
MADDPASAAP SSADQDEEGT DSDASNDSHP PAAQEAPPPP FPDTSAPAFP EPAGPVPPQG 60 ASAAAAAEDS RRLFQRLWTD EEELLILRGF LDFTSRRGTA FASHQYDTGP FYEEIRRKLS 120 FDFSKNQLIE KLRRLKKKYR VCATRMAAQG AAFAFKSAHE GAIYDVARHI WRPAFKRDGA 180 GGDASDEDDI NPAEAAAVAE GGGGGASAHT PRGRGSRRGG RKRMAQEIEA PTFPATPAPM 240 LTDAAQEQAI VAFESSVPVI AQPPSVPAAP LPPYPLTANG PTEADVRSIL SPLLKELISS 300 VAVPGQTGLG LGLGMGFGGA DILGVGLGVA GLSPRVPGDE KWRQQQILEL EVYLKRLELV 360 REQVMTVLQE LRSSES

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

MADDPASAAP SSADQDEEGT DSDASNDSHP PAAQEAPPPP FPDTSAPAFP EPAGPVPPQG  60
ASAAAAAEDS RRLFQRLWTD EEELLILRGF LDFTSRRGTA FASHQYDTGP FYEEIRRKLS  120
FDFSKNQLIE KLRRLKKKYR VCATRMAAQG AAFAFKSAHE GAIYDVARHI WRPAFKRDGA  180
GGDASDEDDI NPAEAAAVAE GGGGGASAHT PRGRGSRRGG RKRMAQEIEA PTFPATPAPM  240
LTDAAQEQAI VAFESSVPVI AQPPSVPAAP LPPYPLTANG PTEADVRSIL SPLLKELISS  300
VAVPGQTGLG LGLGMGFGGA DILGVGLGVA GLSPRVPGDE KWRQQQILEL EVYLKRLELV  360
REQVMTVLQE LRSSES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	6e-29	GeBP family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG027380.2