PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG027140.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WRKY

Protein Properties

Length: 390aa MW: 41265.8 Da PI: 11.4777

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG027140.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.6	8.3e-31	120	178	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ TRIDC3BG027140.3 120 ADGCQWRKYGQKMAKGNPCPRAYYRCTMAtGCPVRKQVQRCAEDRTILITTYEGTHNHP 178 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence
MRCRCISSRS CSKGPRCLRS SRNNLRPTRM ARTRVPSCRG SSWVWARREP ALTWRKSPPT 60 RPRRSGARGG RRPTETRTLS AAKTLTLGAA AKGHDQQAQE ATMRKARVSV RARSEAPIIA 120 DGCQWRKYGQ KMAKGNPCPR AYYRCTMATG CPVRKQVQRC AEDRTILITT YEGTHNHPLP 180 PAAMAMASTT SAAASMLLSG SMPSADGAGL MSSNFLARTV LPCSSSMATI SASAPFPTVT 240 LDLTHAPPGA PNAMPLNVAR PHAPGQFHVP MPGGGMAPAF AMPPHMLYNQ SKFSGLQMSS 300 DSVDAGQFAQ PRPPMGLPGQ LSDTVSAAAA AITADPNFTV ALAAAISSIM AGQHAAGNSN 360 ANNSNNNTSN NNVTTTSNNT TSNNTNSETQ

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence

MRCRCISSRS CSKGPRCLRS SRNNLRPTRM ARTRVPSCRG SSWVWARREP ALTWRKSPPT  60
RPRRSGARGG RRPTETRTLS AAKTLTLGAA AKGHDQQAQE ATMRKARVSV RARSEAPIIA  120
DGCQWRKYGQ KMAKGNPCPR AYYRCTMATG CPVRKQVQRC AEDRTILITT YEGTHNHPLP  180
PAAMAMASTT SAAASMLLSG SMPSADGAGL MSSNFLARTV LPCSSSMATI SASAPFPTVT  240
LDLTHAPPGA PNAMPLNVAR PHAPGQFHVP MPGGGMAPAF AMPPHMLYNQ SKFSGLQMSS  300
DSVDAGQFAQ PRPPMGLPGQ LSDTVSAAAA AITADPNFTV ALAAAISSIM AGQHAAGNSN  360
ANNSNNNTSN NNVTTTSNNT TSNNTNSETQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	9e-82	WRKY family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG027140.3