PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG027140.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WRKY

Protein Properties

Length: 626aa MW: 65768.2 Da PI: 8.3056

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG027140.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.6	1.6e-30	356	414	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ TRIDC3BG027140.1 356 ADGCQWRKYGQKMAKGNPCPRAYYRCTMAtGCPVRKQVQRCAEDRTILITTYEGTHNHP 414 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 626 aa Download sequence
SSPFFIRAPS YRGETSDSSL FRSLRHVSFS LPLPSATKAS LSSPRRLSIC MDKGHLGGGG 60 GGGGLLALDA SPRQLGFLNL LSPAPFHRSM EADDGGGGGG GGRGRRSIEV DFFSDEKKNM 120 KKSRASSGAD AEDHKDQASA AGLAIKKEDL TINLLPGNNT RSDRSMVVDD DGASRADQDR 180 NGRNTGELAV IQAELSRMNE ENQRLRGMLT QVNNSYHALQ MHLVALMQQR TQMPPVQPQQ 240 PPTHEDGKNE SAIVPRQFLG LGPSGASADV AEEPSNSSTE VGSPRRSSSN GNEDPERGEN 300 PDGPSTAGWL PGRGMSQQQQ QQLGAAAKGH DQQAQEATMR KARVSVRARS EAPIIADGCQ 360 WRKYGQKMAK GNPCPRAYYR CTMATGCPVR KQVQRCAEDR TILITTYEGT HNHPLPPAAM 420 AMASTTSAAA SMLLSGSMPS ADGAGLMSSN FLARTVLPCS SSMATISASA PFPTVTLDLT 480 HAPPGAPNAM PLNVARPHAP GQFHVPMPGG GMAPAFAMPP HMLYNQSKFS GLQMSSDSVD 540 AGQFAQPRPP MGLPGQLSDT VSAAAAAITA DPNFTVALAA AISSIMAGQH AAGNSNANNS 600 NNNTSNNNVT TTSNNTTSNN TNSETQ

Sequence ? help Back to Top

Protein Sequence Length: 626 aa Download sequence

SSPFFIRAPS YRGETSDSSL FRSLRHVSFS LPLPSATKAS LSSPRRLSIC MDKGHLGGGG  60
GGGGLLALDA SPRQLGFLNL LSPAPFHRSM EADDGGGGGG GGRGRRSIEV DFFSDEKKNM  120
KKSRASSGAD AEDHKDQASA AGLAIKKEDL TINLLPGNNT RSDRSMVVDD DGASRADQDR  180
NGRNTGELAV IQAELSRMNE ENQRLRGMLT QVNNSYHALQ MHLVALMQQR TQMPPVQPQQ  240
PPTHEDGKNE SAIVPRQFLG LGPSGASADV AEEPSNSSTE VGSPRRSSSN GNEDPERGEN  300
PDGPSTAGWL PGRGMSQQQQ QQLGAAAKGH DQQAQEATMR KARVSVRARS EAPIIADGCQ  360
WRKYGQKMAK GNPCPRAYYR CTMATGCPVR KQVQRCAEDR TILITTYEGT HNHPLPPAAM  420
AMASTTSAAA SMLLSGSMPS ADGAGLMSSN FLARTVLPCS SSMATISASA PFPTVTLDLT  480
HAPPGAPNAM PLNVARPHAP GQFHVPMPGG GMAPAFAMPP HMLYNQSKFS GLQMSSDSVD  540
AGQFAQPRPP MGLPGQLSDT VSAAAAAITA DPNFTVALAA AISSIMAGQH AAGNSNANNS  600
NNNTSNNNVT TTSNNTTSNN TNSETQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-114	WRKY family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG027140.1