PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG026280.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 629aa MW: 68567.4 Da PI: 7.6084

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG026280.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.5	9.9e-13	475	521	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI +Lq TRIDC3BG026280.2 475 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAIAYITDLQ 521 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 629 aa Download sequence
RFGLGIPGPG LMVMKMEVEE DGANGGNGGA WTEEDRDLST TVLGRDAFAY LTKGGGTISE 60 GLVAASSPVD LQNKLQELIE SEHPGAGWNY AIFWQLSRTK SGDLVLGWGD GSCREPNDAE 120 LAAAASAGND DAKQRMRKRV LQRLHKAFGG ADEEDYAPTI GQVTDTEMFF LASMYFAFPR 180 RAGAPGQVFA AGLPLWVPNS ERNVFPANYC YRGYLASTAG FRTILLVPFE TGVLELGSMQ 240 QVAESSDTLQ TIKSVFAGTG GNKDIIPSRE GNGHIERSPG LAKIFGKDLN LGRSSAGPVI 300 GASKVDERPW EQRTAGGGSS LLPNVQKGLQ SFTWSQARGL NSHQQKFGNG ILIVSNEATH 360 GNNRAADSST TTQFQLQKAP QLQKLPLLQK PPQLVKPLQM VNQQQLQPQA PRQIDFSAGT 420 SSKSGVLVTR AAVLDGDSSE VNGLCKEEGT TPVIEDRRPR KRGRKPANGR EEPLNHVEAE 480 RQRREKLNQR FYALRAVVPN ISKMDKASLL GDAIAYITDL QKKLKDMETE RERFLESGMV 540 DPRERAPRPE VDIQVVQDEV LVRVMSPLEN HPIKKVFEAF EEADVRVGES KLTGNNGTVV 600 HSFIIKCPGS EQQTREKVIA AMSRAMSSV

Sequence ? help Back to Top

Protein Sequence Length: 629 aa Download sequence

RFGLGIPGPG LMVMKMEVEE DGANGGNGGA WTEEDRDLST TVLGRDAFAY LTKGGGTISE  60
GLVAASSPVD LQNKLQELIE SEHPGAGWNY AIFWQLSRTK SGDLVLGWGD GSCREPNDAE  120
LAAAASAGND DAKQRMRKRV LQRLHKAFGG ADEEDYAPTI GQVTDTEMFF LASMYFAFPR  180
RAGAPGQVFA AGLPLWVPNS ERNVFPANYC YRGYLASTAG FRTILLVPFE TGVLELGSMQ  240
QVAESSDTLQ TIKSVFAGTG GNKDIIPSRE GNGHIERSPG LAKIFGKDLN LGRSSAGPVI  300
GASKVDERPW EQRTAGGGSS LLPNVQKGLQ SFTWSQARGL NSHQQKFGNG ILIVSNEATH  360
GNNRAADSST TTQFQLQKAP QLQKLPLLQK PPQLVKPLQM VNQQQLQPQA PRQIDFSAGT  420
SSKSGVLVTR AAVLDGDSSE VNGLCKEEGT TPVIEDRRPR KRGRKPANGR EEPLNHVEAE  480
RQRREKLNQR FYALRAVVPN ISKMDKASLL GDAIAYITDL QKKLKDMETE RERFLESGMV  540
DPRERAPRPE VDIQVVQDEV LVRVMSPLEN HPIKKVFEAF EEADVRVGES KLTGNNGTVV  600
HSFIIKCPGS EQQTREKVIA AMSRAMSSV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	457	465	RRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	7e-62	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG026280.2