PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG026190.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 758aa    MW: 83510.2 Da    PI: 6.5635
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG026190.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B369.54.6e-22177277198
                       EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                       f+k+ltpsd++++g +++ +++a+e+       ++ + +++++ +d++g +W++k+iyr++++r++lt+GW+ Fv +++L +gD +v    ++
  TRIDC3BG026190.5 177 FCKILTPSDTSTHGGFSVLRRHANEClppldmAMP-TPTQEIISKDLHGSEWRFKHIYRGQPRRHLLTTGWSTFVTSKKLMAGDAFVYL--RS 266
                       99****************************97444.44569*********************************************999..44 PP

                       SEE..EEEEE- CS
                B3  88 sefelvvkvfr 98 
                       +++e +v+v+r
  TRIDC3BG026190.5 267 ETGEQRVGVRR 277
                       77778999997 PP
2Auxin_resp97.32.3e-32303384183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       a+ha++t+s+F v+Y+Pr s+s+++v+v+k+++a k+ ++vGmRf+m+fe ed++ +++ Gt+vg  dl+p +W++S+W+sLk
  TRIDC3BG026190.5 303 ASHALKTNSIFVVYYRPRLSQSQYIVSVNKYLQASKTGFTVGMRFRMNFEAEDVPVKKFFGTIVGDGDLSP-QWSGSEWKSLK 384
                       789********************************************************************.*********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 758 aa     Download sequence    
MGRAQQQTLT QGEHHPVPRP DQLLLPPSLS PRPHSSFPPG EDRTAEPVHH QPTATRVAMA  60
QPGRGRDPEL FAELWRACAG PLVEVPQRGE RVFYFLQGHL EQLQEPTDSA LLAEQIKMFQ  120
VPYKILCKVV NVELKAEAET DEVYAQITLQ PESDQDNLPL ICDPILPETP RPVVHTFCKI  180
LTPSDTSTHG GFSVLRRHAN ECLPPLDMAM PTPTQEIISK DLHGSEWRFK HIYRGQPRRH  240
LLTTGWSTFV TSKKLMAGDA FVYLRSETGE QRVGVRRLVQ KQSTMPASVI SSQSMHLGVL  300
ASASHALKTN SIFVVYYRPR LSQSQYIVSV NKYLQASKTG FTVGMRFRMN FEAEDVPVKK  360
FFGTIVGDGD LSPQWSGSEW KSLKVQWDDS VAICNGPERV SPWEIDSSDG SSPAISALLQ  420
SSAKNKRPRE ANENFDLPSQ EPTQEFWLSG MTQQHERTYV GSSDPNRISG YHQILWPSSE  480
PAGYGAMSSS SVCQTPLGLG DGWPKDFNPS SQGVSPTLSE ITQKLNRVAS SEGRAPPPWA  540
TALCGGYRAE EPTSKLSCNT TLPLPEQVAP YLPKVAEKAK EPGVVRLFGV NLMENTNNAA  600
APTAGNASAG AGETSARVAG SVEGSGQLSA FSKVTKVANE SPREIQSQQS NIGRNRVKVQ  660
MHGNAVGRAV DLASLDGYEG LTSELEQMFE IKDIKQNFKV AFTDNEGDTM KVGDDPWMEF  720
CRMVRKIVIY PIEDDKNMDP RQRSVLAAAP DPDPKANL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46530.11e-165ARF family protein