PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG026110.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 618aa MW: 69339.4 Da PI: 8.0748

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG026110.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.2	8e-29	484	534	1	51
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiks 51 aek+isle+l++yFs+++k+AAk+Lgvc+T++KriCRq+GI+RWP+Rki++ TRIDC3BG026110.3 484 AEKTISLEVLQQYFSGSLKNAAKSLGVCPTTMKRICRQHGISRWPSRKINK 534 589**********************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 618 aa Download sequence
KTERLNNKWQ FNLALHDDST NSSCLFKEKL THALRYFKES TDQHLLVQVW APVKSGDRYV 60 LTTSGQPFVL DHQSIGLLQY RAVSMMYMFS VDGDNAGELG LPGRVYKQKV PEWTPNVQYY 120 SSTEYPRLNH AISYNVHGTV ALPVFDPSVQ SCIAVVELIM TSKKINYADE VDKVCKALEA 180 VNLKSTEILE HPNVQICNEG RQSALVEILE ILTVVCEEHK LPLAQTWVPC KYRSVLAHGG 240 GVKKSCLSFD GSCMGEVCMS TSDVAFHVID AHMWGFRDAC VEHHLQKGQG VSGKAFIYQR 300 PCFSKDISQF CKLEYPLVHY ARMFGLAGCF AICLQSPYTG DDYYMLEFFL PPSCKEEDDQ 360 NALLESILGL INQCLRNLKV AGNGESNEAS LQLSNVIMIE SEDFKTNVHF ENSEGFRESP 420 EGETHGGAHE FDKVNSKVSE GHLLADDNSH NNGVSVSRPN GSAASDSSLL HKNGKPPERR 480 RGKAEKTISL EVLQQYFSGS LKNAAKSLGV CPTTMKRICR QHGISRWPSR KINKALSLLF 540 LLALHQILSI KRKQVKVKQN IQIVLLMVTE IHLYRNHRKM VATLVHSCPS KDLQTLGTMF 600 NLKQTKLLSR EAHREKAA

Sequence ? help Back to Top

Protein Sequence Length: 618 aa Download sequence

KTERLNNKWQ FNLALHDDST NSSCLFKEKL THALRYFKES TDQHLLVQVW APVKSGDRYV  60
LTTSGQPFVL DHQSIGLLQY RAVSMMYMFS VDGDNAGELG LPGRVYKQKV PEWTPNVQYY  120
SSTEYPRLNH AISYNVHGTV ALPVFDPSVQ SCIAVVELIM TSKKINYADE VDKVCKALEA  180
VNLKSTEILE HPNVQICNEG RQSALVEILE ILTVVCEEHK LPLAQTWVPC KYRSVLAHGG  240
GVKKSCLSFD GSCMGEVCMS TSDVAFHVID AHMWGFRDAC VEHHLQKGQG VSGKAFIYQR  300
PCFSKDISQF CKLEYPLVHY ARMFGLAGCF AICLQSPYTG DDYYMLEFFL PPSCKEEDDQ  360
NALLESILGL INQCLRNLKV AGNGESNEAS LQLSNVIMIE SEDFKTNVHF ENSEGFRESP  420
EGETHGGAHE FDKVNSKVSE GHLLADDNSH NNGVSVSRPN GSAASDSSLL HKNGKPPERR  480
RGKAEKTISL EVLQQYFSGS LKNAAKSLGV CPTTMKRICR QHGISRWPSR KINKALSLLF  540
LLALHQILSI KRKQVKVKQN IQIVLLMVTE IHLYRNHRKM VATLVHSCPS KDLQTLGTMF  600
NLKQTKLLSR EAHREKAA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	0.0	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG026110.3