PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG022580.15
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HD-ZIP
Protein Properties Length: 690aa    MW: 74964.9 Da    PI: 6.5534
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG022580.15genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox23.21.2e-074233857
                       TS-HHHHHHHHHHHHHHHHC CS
           Homeobox 38 gLterqVkvWFqNrRakekk 57
                       +++ +q+kvWFqNrR +ek+
  TRIDC3BG022580.15  4 NVDPKQIKVWFQNRRCREKQ 23
                       6899**************97 PP
2START173.61.2e-541103172204
                        HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEE CS
              START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..gal 91 
                        +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s+++ g a+ra+g+v m++a  v+e+l+d++ W ++++++e+++v+  g  g++
  TRIDC3BG022580.15 110 IAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIIAISHGCAGVAARACGLVGMEPA-KVAEILKDRPLWLRDCRSMEVVNVLPAGsnGTI 200
                        789*******************************************************.8888888888*********************** PP

                        EEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHH CS
              START  92 qlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphw 179
                        +l +++l+a+++l+p Rdf+  Ry+  l +g++v++++S++s+q  p+    +++vR+e+lpSg+li+p+++g+s +++v+h dl+ +++++
  TRIDC3BG022580.15 201 ELLYMQLYAPTTLAPaRDFWLMRYTSILDDGSLVVCERSLSSKQGGPSmplVQPFVRGEMLPSGFLIRPSDGGGSVIHIVDHLDLEPWSVPE 292
                        ***********************************************999999*************************************** PP

                        HHHHHHHHHHHHHHHHHHHHTXXXX CS
              START 180 llrslvksglaegaktwvatlqrqc 204
                        ++r+l++s+++ ++k+ +a+l++++
  TRIDC3BG022580.15 293 VVRPLYESSAMVAQKMSMAALRYLR 317
                        *********************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 690 aa     Download sequence    
VLANVDPKQI KVWFQNRRCR EKQRKESGRL QSLNRKLTAM NKLLMEENDR LQKQVSHLVY  60
QNGYYRQQTH SAGLATTDTS CESVVTSGQQ NVVVVPPPPR DASPAGLMSI AEETLTEFLS  120
KATGTAVEWV QMPGMKPGPD SIGIIAISHG CAGVAARACG LVGMEPAKVA EILKDRPLWL  180
RDCRSMEVVN VLPAGSNGTI ELLYMQLYAP TTLAPARDFW LMRYTSILDD GSLVVCERSL  240
SSKQGGPSMP LVQPFVRGEM LPSGFLIRPS DGGGSVIHIV DHLDLEPWSV PEVVRPLYES  300
SAMVAQKMSM AALRYLRQVA HEDTHSVITG WGRQPAALRA LSQKLTRGFN ETLGGLADDG  360
WSVIESDGVD DVCISVNSSP SKVMSCTATF SDGLPMVSTG VLCAKASMLL QDVSPPSLLR  420
FLREHRSQWA DSSLDAFFAS ALKPNFCNLP MSRLGGFSGQ VILPLAHTFD PEEFLEVIKI  480
GNASNYQDTL MHRDLFLLQM YNGIEENTMG TCSELIFAPI DASFGDDSPL LPSGFRIIPI  540
DSPLDTSSPN CTLDLASTLE VGTPGSRITG HSRSGSKAVM TIAFQFAFES HLQDSVAAMA  600
RQYMRSIISS VQRIALALSS SHLVPHGSSH LVPPVTPEAA TLSRWIVQSY RFHFGAELIK  660
AADAGSGESA LKALWQHTSA ILCCSLKAMP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52150.30.0HD-ZIP family protein