PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG022580.13
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HD-ZIP
Protein Properties Length: 840aa    MW: 91289.6 Da    PI: 6.2401
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG022580.13genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.79.4e-191674357
                       --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
           Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                       k  ++t+eq+e+Le+l++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  TRIDC3BG022580.13 16 KYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECavlaNVDPKQIKVWFQNRRCREKQ 74
                       6789*****************************************************97 PP

2START167.68.4e-531613622198
                        HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEE CS
              START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..gal 91 
                        +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s+++ g a+ra+g+v m++a  v+e+l+d++ W ++++++e+++v+  g  g++
  TRIDC3BG022580.13 161 IAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIIAISHGCAGVAARACGLVGMEPA-KVAEILKDRPLWLRDCRSMEVVNVLPAGsnGTI 251
                        789*******************************************************.8888888888*********************** PP

                        EEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHH CS
              START  92 qlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphw 179
                        +l +++l+a+++l+p Rdf+  Ry+  l +g++v++++S++s+q  p+    +++vR+e+lpSg+li+p+++g+s +++v+h dl+ +++++
  TRIDC3BG022580.13 252 ELLYMQLYAPTTLAPaRDFWLMRYTSILDDGSLVVCERSLSSKQGGPSmplVQPFVRGEMLPSGFLIRPSDGGGSVIHIVDHLDLEPWSVPE 343
                        ***********************************************999999*************************************** PP

                        HHHHHHHHHHHHHHHHHHH CS
              START 180 llrslvksglaegaktwva 198
                        ++r+l++s+++ ++k+ +a
  TRIDC3BG022580.13 344 VVRPLYESSAMVAQKMSMA 362
                        ***************9987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 840 aa     Download sequence    
MVTAREAAAA AMDASKYVRY TPEQVEALER LYYECPKPSS LRRQQLVREC AVLANVDPKQ  60
IKVWFQNRRC REKQRKESGR LQSLNRKLTA MNKLLMEEND RLQKQVSHLV YQNGYYRQQT  120
HSAGLATTDT SCESVVTSGQ QNVVVVPPPP RDASPAGLMS IAEETLTEFL SKATGTAVEW  180
VQMPGMKPGP DSIGIIAISH GCAGVAARAC GLVGMEPAKV AEILKDRPLW LRDCRSMEVV  240
NVLPAGSNGT IELLYMQLYA PTTLAPARDF WLMRYTSILD DGSLVVCERS LSSKQGGPSM  300
PLVQPFVRGE MLPSGFLIRP SDGGGSVIHI VDHLDLEPWS VPEVVRPLYE SSAMVAQKMS  360
MALRYLRQVA HEDTHSVITG WGRQPAALRA LSQKLTRGFN ETLGGLADDG WSVIESDGVD  420
DVCISVNSSP SKVMSCTATF SDGLPMVSTG VLCAKASMLL QDVSPPSLLR FLREHRSQWA  480
DSSLDAFFAS ALKPNFCNLP MSRLGGFSGQ VILPLAHTFD PEEFLEVIKI GNASNYQDTL  540
MHRDLFLLQM YNGIEENTMG TCSELIFAPI DASFGDDSPL LPSGFRIIPI DSPLDTSSPN  600
CTLDLASTLE VGTPGSRITG HSRSGSKAVM TIAFQFAFES HLQDSVAAMA RQYMRSIISS  660
VQRIALALSS SHLVPHGSSH LVPPVTPEAA TLSRWIVQSY RFHFGAELIK AADAGSGESA  720
LKALWQHTSA ILCCSLKAMP VLTFANQSGL DMLETTLAAL REITMDKVLD YDQGRKSLLC  780
ADLMASVAEQ GYACVEGGTC ASSMGRPASY GKAVAWKVLD DGGAGAAHCV CFAFMDWSFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52150.10.0HD-ZIP family protein