PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG022580.13 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 840aa MW: 91289.6 Da PI: 6.2401 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 58.7 | 9.4e-19 | 16 | 74 | 3 | 57 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 k ++t+eq+e+Le+l++++++ps +r++L +++ +++ +q+kvWFqNrR +ek+ TRIDC3BG022580.13 16 KYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECavlaNVDPKQIKVWFQNRRCREKQ 74 6789*****************************************************97 PP | |||||||
2 | START | 167.6 | 8.4e-53 | 161 | 362 | 2 | 198 |
HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEE CS START 2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..gal 91 +aee+++e+++ka+ ++ Wv+++ +++g++++ +++ s+++ g a+ra+g+v m++a v+e+l+d++ W ++++++e+++v+ g g++ TRIDC3BG022580.13 161 IAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIIAISHGCAGVAARACGLVGMEPA-KVAEILKDRPLWLRDCRSMEVVNVLPAGsnGTI 251 789*******************************************************.8888888888*********************** PP EEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHH CS START 92 qlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphw 179 +l +++l+a+++l+p Rdf+ Ry+ l +g++v++++S++s+q p+ +++vR+e+lpSg+li+p+++g+s +++v+h dl+ +++++ TRIDC3BG022580.13 252 ELLYMQLYAPTTLAPaRDFWLMRYTSILDDGSLVVCERSLSSKQGGPSmplVQPFVRGEMLPSGFLIRPSDGGGSVIHIVDHLDLEPWSVPE 343 ***********************************************999999*************************************** PP HHHHHHHHHHHHHHHHHHH CS START 180 llrslvksglaegaktwva 198 ++r+l++s+++ ++k+ +a TRIDC3BG022580.13 344 VVRPLYESSAMVAQKMSMA 362 ***************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 840 aa Download sequence |
MVTAREAAAA AMDASKYVRY TPEQVEALER LYYECPKPSS LRRQQLVREC AVLANVDPKQ 60 IKVWFQNRRC REKQRKESGR LQSLNRKLTA MNKLLMEEND RLQKQVSHLV YQNGYYRQQT 120 HSAGLATTDT SCESVVTSGQ QNVVVVPPPP RDASPAGLMS IAEETLTEFL SKATGTAVEW 180 VQMPGMKPGP DSIGIIAISH GCAGVAARAC GLVGMEPAKV AEILKDRPLW LRDCRSMEVV 240 NVLPAGSNGT IELLYMQLYA PTTLAPARDF WLMRYTSILD DGSLVVCERS LSSKQGGPSM 300 PLVQPFVRGE MLPSGFLIRP SDGGGSVIHI VDHLDLEPWS VPEVVRPLYE SSAMVAQKMS 360 MALRYLRQVA HEDTHSVITG WGRQPAALRA LSQKLTRGFN ETLGGLADDG WSVIESDGVD 420 DVCISVNSSP SKVMSCTATF SDGLPMVSTG VLCAKASMLL QDVSPPSLLR FLREHRSQWA 480 DSSLDAFFAS ALKPNFCNLP MSRLGGFSGQ VILPLAHTFD PEEFLEVIKI GNASNYQDTL 540 MHRDLFLLQM YNGIEENTMG TCSELIFAPI DASFGDDSPL LPSGFRIIPI DSPLDTSSPN 600 CTLDLASTLE VGTPGSRITG HSRSGSKAVM TIAFQFAFES HLQDSVAAMA RQYMRSIISS 660 VQRIALALSS SHLVPHGSSH LVPPVTPEAA TLSRWIVQSY RFHFGAELIK AADAGSGESA 720 LKALWQHTSA ILCCSLKAMP VLTFANQSGL DMLETTLAAL REITMDKVLD YDQGRKSLLC 780 ADLMASVAEQ GYACVEGGTC ASSMGRPASY GKAVAWKVLD DGGAGAAHCV CFAFMDWSFV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G52150.1 | 0.0 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG022580.13 |