PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG018940.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 475aa MW: 51809.1 Da PI: 6.6448

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG018940.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	67.2	3.4e-21	60	177	1	85
trihelix 1 rWtkqevlaLiearremeerlrrgk................................lkkplWeevskkmrergferspkqCkekwenlnkry 61 +Wt+ +v++Li+++ + +++ + + +kk++W++vs++m+e gf +sp+qC++k+++lnkry TRIDC3BG018940.1 60 KWTDAMVRLLIAVVYNAGDDGEGVSaggkaaashshgkagasaaaahgghgpqaaaqQKKGKWKSVSRAMMENGFAVSPQQCEDKFNDLNKRY 152 799******9999555555533223345556666667777777788888888888******************************** PP trihelix 62 kkikegekkr.tsessstcpyfdql 85 k++ + +++ +++++++ ++d + TRIDC3BG018940.1 153 KRVVDLLGRGtACKVVENPTLLDAM 177 ********559999999999888 PP

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence
VRQQHPQPPY AAYVAPPSRA VKAHEEEEMG NVVGNGGGVV QQPRAGAGAG TAGCPWSRMK 60 WTDAMVRLLI AVVYNAGDDG EGVSAGGKAA ASHSHGKAGA SAAAAHGGHG PQAAAQQKKG 120 KWKSVSRAMM ENGFAVSPQQ CEDKFNDLNK RYKRVVDLLG RGTACKVVEN PTLLDAMGEL 180 TAKAKEEARK LLSSKHLFFR EMCTYHNPPG AAAATSHGTD DGAACFHHPQ PAAVPGAANS 240 SAGRQVVAMV NSSTRSEDDS EDDVLSSKEA EEEEDDDDYD LDDVEEKAPG TNRRGGRVDD 300 SNVFHNYGGH KNKRRRGESS AAAAGEDGEE DGNKHARRRS CTMQELQREL AAAEAGGDQQ 360 QLRQWMQRRA LELEKQQLAY EVREYALEKQ RHKWEQFKAT KEWDMEHERL RMERRRVDGQ 420 RMLLVLKQKE FDLDLAEAYN NYSSSVDHHP GAQTPPPAGF QQQPGSSPST TGHPN

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence

VRQQHPQPPY AAYVAPPSRA VKAHEEEEMG NVVGNGGGVV QQPRAGAGAG TAGCPWSRMK  60
WTDAMVRLLI AVVYNAGDDG EGVSAGGKAA ASHSHGKAGA SAAAAHGGHG PQAAAQQKKG  120
KWKSVSRAMM ENGFAVSPQQ CEDKFNDLNK RYKRVVDLLG RGTACKVVEN PTLLDAMGEL  180
TAKAKEEARK LLSSKHLFFR EMCTYHNPPG AAAATSHGTD DGAACFHHPQ PAAVPGAANS  240
SAGRQVVAMV NSSTRSEDDS EDDVLSSKEA EEEEDDDDYD LDDVEEKAPG TNRRGGRVDD  300
SNVFHNYGGH KNKRRRGESS AAAAGEDGEE DGNKHARRRS CTMQELQREL AAAEAGGDQQ  360
QLRQWMQRRA LELEKQQLAY EVREYALEKQ RHKWEQFKAT KEWDMEHERL RMERRRVDGQ  420
RMLLVLKQKE FDLDLAEAYN NYSSSVDHHP GAQTPPPAGF QQQPGSSPST TGHPN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10040.1	1e-46	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG018940.1