PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG018420.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 1106aa MW: 124131 Da PI: 7.5797

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG018420.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	43.6	5.1e-14	37	88	6	57
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 + ++ q++ Le+++ + +yp+ e+ +e A+++gLt +qV++WF+ rR ke++ TRIDC3BG018420.5 37 KKSPLQIQMLESFYSEVQYPKPEDLTEYAASVGLTYNQVRIWFKERRRKERR 88 66899*********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1106 aa Download sequence
CLLVGTSLPR PVRGLWQLGF EMMAKGFLAK SDNAGTKKSP LQIQMLESFY SEVQYPKPED 60 LTEYAASVGL TYNQVRIWFK ERRRKERRHI EAAEVYMETQ ATARSNWPRC SSSRSSNSSQ 120 SPMQDTTGHH SYQDQSVLKK RKIMSPTAQR FTLPFENNDP VRKHGKGKGL MTVWHAMYSQ 180 TAEIQDCSSF IDETGCLRSL RPFEDFGGKL AQKQTLPRKK VNKKSRSSPS KRKVPCGRVT 240 DLKEHPPVEC HLSVDESESS ELRTEQATLV DDEELELSEL QAGPNPLRCS AHISSTGRHG 300 CPLCKDLLAR FPPPSVRMKQ PFPTKPWESS PEMVKKLFQV VRFVYTHFGS MDVHPFTFDE 360 FAQAFHDKDS SLLGKVHVSL LKLLMLNTER GSGSVFVPRS SKDSRFSSFL NFVREQEFDV 420 NFWIKSLNSL TWVEILRQVL VASGFGSDHH MLNRNFFNKE KNQMVKYGLR PRTLKGELFT 480 LLSKKGSGGL KVAELAKSPQ IIGLNLSGAS EVEQLIFSTL SSDITLFEKI APCAYRLRVD 540 PRIKGKEDPR SDTEDSGTVD NDGDASSSGD ESDGPQESYP EHESRIVRWR QKNVHKNMNK 600 CSEIDESYSG ERWLLGLMEG EYSDLSIDEK LDCLVALIDV VSGAGSVPRL EEPQSVLSNI 660 QRAQSHASGG KIKKCTRTIY QSSDEYLNRP GSSHSFDSSM QGQSGSLRSQ DYIADSGANE 720 SPTGFAHQPQ IVLLGSDRRY NNYWLFLGPC RADDPGHRRV YFESSEDGHW EVIDSPQDLL 780 SLLSVLDIRG TREAHLLASM KKRQSCLFEG MKKHLEDGCV VALTASSDSS RSETSSGNRY 840 SPKPSSGDGA SPLSDIDSAS VPIYLAGNLQ NASSAIGIEV GRRSDEKMLK WERLQALDKW 900 IWTSFYSSLT AVKCGKKSFK ESLVHCESCH DLYWRDEKHC RICHSTFEVG FDLEERYAIH 960 VATCREPEDL YDVPNHKVLP SQLQALKAAI HAIEARMPTA AFAGLWMKSS HNLWVKRLRR 1020 TSSLPELLQV LVDFVGAFDE DWLYQSSSAV SFSSYLDDIT VYFQTMPQTT SAVALWVVKL 1080 DALIAPHLAQ ADSGRGLGKG SIQTRA

Sequence ? help Back to Top

Protein Sequence Length: 1106 aa Download sequence

CLLVGTSLPR PVRGLWQLGF EMMAKGFLAK SDNAGTKKSP LQIQMLESFY SEVQYPKPED  60
LTEYAASVGL TYNQVRIWFK ERRRKERRHI EAAEVYMETQ ATARSNWPRC SSSRSSNSSQ  120
SPMQDTTGHH SYQDQSVLKK RKIMSPTAQR FTLPFENNDP VRKHGKGKGL MTVWHAMYSQ  180
TAEIQDCSSF IDETGCLRSL RPFEDFGGKL AQKQTLPRKK VNKKSRSSPS KRKVPCGRVT  240
DLKEHPPVEC HLSVDESESS ELRTEQATLV DDEELELSEL QAGPNPLRCS AHISSTGRHG  300
CPLCKDLLAR FPPPSVRMKQ PFPTKPWESS PEMVKKLFQV VRFVYTHFGS MDVHPFTFDE  360
FAQAFHDKDS SLLGKVHVSL LKLLMLNTER GSGSVFVPRS SKDSRFSSFL NFVREQEFDV  420
NFWIKSLNSL TWVEILRQVL VASGFGSDHH MLNRNFFNKE KNQMVKYGLR PRTLKGELFT  480
LLSKKGSGGL KVAELAKSPQ IIGLNLSGAS EVEQLIFSTL SSDITLFEKI APCAYRLRVD  540
PRIKGKEDPR SDTEDSGTVD NDGDASSSGD ESDGPQESYP EHESRIVRWR QKNVHKNMNK  600
CSEIDESYSG ERWLLGLMEG EYSDLSIDEK LDCLVALIDV VSGAGSVPRL EEPQSVLSNI  660
QRAQSHASGG KIKKCTRTIY QSSDEYLNRP GSSHSFDSSM QGQSGSLRSQ DYIADSGANE  720
SPTGFAHQPQ IVLLGSDRRY NNYWLFLGPC RADDPGHRRV YFESSEDGHW EVIDSPQDLL  780
SLLSVLDIRG TREAHLLASM KKRQSCLFEG MKKHLEDGCV VALTASSDSS RSETSSGNRY  840
SPKPSSGDGA SPLSDIDSAS VPIYLAGNLQ NASSAIGIEV GRRSDEKMLK WERLQALDKW  900
IWTSFYSSLT AVKCGKKSFK ESLVHCESCH DLYWRDEKHC RICHSTFEVG FDLEERYAIH  960
VATCREPEDL YDVPNHKVLP SQLQALKAAI HAIEARMPTA AFAGLWMKSS HNLWVKRLRR  1020
TSSLPELLQV LVDFVGAFDE DWLYQSSSAV SFSSYLDDIT VYFQTMPQTT SAVALWVVKL  1080
DALIAPHLAQ ADSGRGLGKG SIQTRA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	139	168	KKRKIMSPTAQRFTLPFENNDPVRKHGKGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12750.1	1e-135	HB-other family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG018420.5