PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG018420.22 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HB-other | ||||||||
Protein Properties | Length: 348aa MW: 39322.8 Da PI: 9.6534 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 45.7 | 1.1e-14 | 44 | 95 | 6 | 57 |
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 + ++ q++ Le+++ + +yp+ e+ +e A+++gLt +qV++WF+ rR ke++ TRIDC3BG018420.22 44 KKSPLQIQMLESFYSEVQYPKPEDLTEYAASVGLTYNQVRIWFKERRRKERR 95 66899*********************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 348 aa Download sequence |
SPPSPSPCLL VGTSLPRPVR GLWQLGFEMM AKGFLAKSDN AGTKKSPLQI QMLESFYSEV 60 QYPKPEDLTE YAASVGLTYN QVRIWFKERR RKERRHIEAA EVYMETQATA RSNWPRCSSS 120 RSSNSSQSPM QVADTTGHHS YQDQSVLKKR KIMSPTAQRF TLPFENNDPV RKHGKGKGLM 180 TVWHAMYSQT AEIQDCSSFI DETGCLRSLR PFEDFGGKLA QKQTLPRKKV NKKSRSSPSK 240 RKVPCGRVTD LKEHPPVECH LSVDESESSE LRTEQATLVD DEELELSELQ AGPNPLRCSA 300 HISSTGRHGC PLCKDLLARF PPPSVRMKQP FPTKPWESSP EMVKKLFQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 148 | 177 | KKRKIMSPTAQRFTLPFENNDPVRKHGKGK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G12750.1 | 1e-22 | HB-other family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG018420.22 |