PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG018420.17

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 1101aa MW: 123620 Da PI: 7.4048

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG018420.17	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	43.6	5e-14	16	67	6	57
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 + ++ q++ Le+++ + +yp+ e+ +e A+++gLt +qV++WF+ rR ke++ TRIDC3BG018420.17 16 KKSPLQIQMLESFYSEVQYPKPEDLTEYAASVGLTYNQVRIWFKERRRKERR 67 66899*********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1101 aa Download sequence
MMAKGFLAKS DNAGTKKSPL QIQMLESFYS EVQYPKPEDL TEYAASVGLT YNQVRIWFKE 60 RRRKERRHIE AAEVYMETQA TARSNWPRCS SSRSSNSSQS PMQVADTTGH HSYQDQSVLK 120 KRKIMSPTAQ RFTLPFENND PVRKHGKGKG LMTVWHAMYS QTAEIQDCSS FIDETGCLRS 180 LRPFEDFGGK LAQKQTLPRK KVNKKSRSSP SKRKVPCGRV TDLKEHPPVE CHLSVDESES 240 SELRTEQATL VDDEELELSE LQAGPNPLRC SAHISSTGRH GCPLCKDLLA RFPPPSVRMK 300 QPFPTKPWES SPEMVKKLFQ VVRFVYTHFG SMDVHPFTFD EFAQAFHDKD SSLLGKVHVS 360 LLKLLMLNTE RGSGSVFVPR SSKDSRFSSF LNFVREQEFD VNFWIKSLNS LTWVEILRQV 420 LVASGFGSDH HMLNRNFFNK EKNQMVKYGL RPRTLKGELF TLLSKKGSGG LKVAELAKSP 480 QIIGLNLSGA SEVEQLIFST LSSDITLFEK IAPCAYRLRV DPRIKGKEDP RSDTEDSGTV 540 DNDGDASSSG DESDGPQESY PEHESRIVRW RQKNVHKNMN KCSEIDESYS GERWLLGLME 600 GEYSDLSIDE KLDCLVALID VVSGAGSVPR LEEPQSVLSN IQRAQSHASG GKIKKCTRTI 660 YQSSDEYLNR PGSSHSFDSS MQGQSGSLRS QDYIADSGAN ESPTGFAHQP QIVLLGSDRR 720 YNNYWLFLGP CRADDPGHRR VYFESSEDGH WEVIDSPQDL LSLLSVLDIR GTREAHLLAS 780 MKKRQSCLFE GMKKHLEDGC VVALTASSDS SRSETSSGNR YSPKPSSGDG ASPLSDIDSA 840 SVPIYLAGNL QNASSAIGIE VGRRSDEKML KWERLQALDK WIWTSFYSSL TAVKCGKKSF 900 KESLVHCESC HDLYWRDEKH CRICHSTFEV GFDLEERYAI HVATCREPED LYDVPNHKVL 960 PSQLQALKAA IHAIEARMPT AAFAGLWMKS SHNLWVKRLR RTSSLPELLQ VLVDFVGAFD 1020 EDWLYQSSSA VSFSSYLDDI TVYFQTMPQT TSAVALWVVK LDALIAPHLA QADSGRGLGK 1080 GSIQTSMYLA DSQSYLLPPF R

Sequence ? help Back to Top

Protein Sequence Length: 1101 aa Download sequence

MMAKGFLAKS DNAGTKKSPL QIQMLESFYS EVQYPKPEDL TEYAASVGLT YNQVRIWFKE  60
RRRKERRHIE AAEVYMETQA TARSNWPRCS SSRSSNSSQS PMQVADTTGH HSYQDQSVLK  120
KRKIMSPTAQ RFTLPFENND PVRKHGKGKG LMTVWHAMYS QTAEIQDCSS FIDETGCLRS  180
LRPFEDFGGK LAQKQTLPRK KVNKKSRSSP SKRKVPCGRV TDLKEHPPVE CHLSVDESES  240
SELRTEQATL VDDEELELSE LQAGPNPLRC SAHISSTGRH GCPLCKDLLA RFPPPSVRMK  300
QPFPTKPWES SPEMVKKLFQ VVRFVYTHFG SMDVHPFTFD EFAQAFHDKD SSLLGKVHVS  360
LLKLLMLNTE RGSGSVFVPR SSKDSRFSSF LNFVREQEFD VNFWIKSLNS LTWVEILRQV  420
LVASGFGSDH HMLNRNFFNK EKNQMVKYGL RPRTLKGELF TLLSKKGSGG LKVAELAKSP  480
QIIGLNLSGA SEVEQLIFST LSSDITLFEK IAPCAYRLRV DPRIKGKEDP RSDTEDSGTV  540
DNDGDASSSG DESDGPQESY PEHESRIVRW RQKNVHKNMN KCSEIDESYS GERWLLGLME  600
GEYSDLSIDE KLDCLVALID VVSGAGSVPR LEEPQSVLSN IQRAQSHASG GKIKKCTRTI  660
YQSSDEYLNR PGSSHSFDSS MQGQSGSLRS QDYIADSGAN ESPTGFAHQP QIVLLGSDRR  720
YNNYWLFLGP CRADDPGHRR VYFESSEDGH WEVIDSPQDL LSLLSVLDIR GTREAHLLAS  780
MKKRQSCLFE GMKKHLEDGC VVALTASSDS SRSETSSGNR YSPKPSSGDG ASPLSDIDSA  840
SVPIYLAGNL QNASSAIGIE VGRRSDEKML KWERLQALDK WIWTSFYSSL TAVKCGKKSF  900
KESLVHCESC HDLYWRDEKH CRICHSTFEV GFDLEERYAI HVATCREPED LYDVPNHKVL  960
PSQLQALKAA IHAIEARMPT AAFAGLWMKS SHNLWVKRLR RTSSLPELLQ VLVDFVGAFD  1020
EDWLYQSSSA VSFSSYLDDI TVYFQTMPQT TSAVALWVVK LDALIAPHLA QADSGRGLGK  1080
GSIQTSMYLA DSQSYLLPPF R

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	120	149	KKRKIMSPTAQRFTLPFENNDPVRKHGKGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12750.1	1e-135	HB-other family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG018420.17